Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00959 ATGATTGAAAAAGTTGAAAAGCTTGACATGGAAAAAGTGATAGAAAATTTTGAGAGATTAACAAAGGATGCTGAGAAAGTTCAAAGGGAAACATTGAAGAGGATTTTGGAAGAAAATGCATCAGCTGAATACTTACAGAATTTAGGACTTAATGGAAGAACTGATCCTGAAAGTTTTAAGGCTTGTGTTCCATTGGTTATTTACAAAGATTTGGAACCTTATATCAATCGAATGGTTGGTGGTGATGTTTCTCCTATTCTCACTGGAAAACCAATCACAGGAATTTCTTTAAGTTCTGGTACTAGTCAAGGGAAACAAAAGTTTATACCATGGAATGATGAATTGTTTGAAACCACTGTTCAGATATATCAAACCTCTTTTGCCTTTAGAAACAGAGATTTTCCTATCCAAAATGGCAAGGCCTTAGGCTTCATCTATAGCAGCAAATCATCACAAACAAAAGGAGGTGTGACAGCAGCAACAGCAACAGCCAATGTATTCAAAAATCCAGGATACAAGCATGTAATGGAGGCACTTAAATCTCCTAGTGTCAGTCCAGATGAGGTTATCTTCAGTCCAGATTTTCACCAAACACTCTACTGTCACCTCTTATGTGGActacttttcagagaagaagtTCAAATTGTTTCATCAACATTTGCATATAGCATAGTCTATGCTTTCAGAGCCTTTGAACAAGTTTTCGAAGAACTTGTTAATGATATCAAACAAGGTGTTCTTAGCAATAGGGTAACACATCAATCCATTAGAACTGCTATGTCAAAATTGCTGAAACCAAATCCTGAACTAGCTAACTTGATCCACAAGAAATGTACAGGATTAAGCAATTGGTATGGATTGATACCAGAGCTTTTTCCCAATGTTAAATATATTCAAGGGATCATGACAGGTTCAATGGAAGCTTATTTGAAAAAGCTAAGACACTATGCAGGAGATGTTCCTCTGTTGACTTCTGAATATGGTTCTTCTGAAGGTTGGATTGCTTCAAATGTTAATCCAAAAGTAGCTCCTGAGTTTGCTACTTATGCTATTCTTCCTCAAATTGCTTATTTTGAATTCATTCCTTTGACACAACTTGATGGAAATGAGGTTGAGCTAAAGCCAGTTGGATTAACTGATGTGAAGATTGGTGAAGAGTATGAGATTGTACTCACCAATCCTGCAGGCTTATATAGGTATAGGCTAGGAGATGCGGTAAAGGTTATGGGGTTTTATAACTCAACTCCAGAAATCAAGTTTCTTCGCAGGAACAACCTTTTACTCACAATTAATATTGATAAGAACACAGAGAATGATCTACAACTATCAGTGGAAACCGCATCTGAGTTATTAGCTAAGGAGAAAATGGAAGTGATAGATTACACTAGTTACATCGATTTATCCAAAGAACCGGGACGCTACGTTATCTTCTGGGAAATCAGTGGTGAAgcaaatgacaaattgttaagTGAATGTTGCACATGTTTGGACAAGTCTTTTGTTGATCTTGGTTACATTAGTTCGAGAAAATCCAAAGGCATTGGAGCTCTTGAACTTCGAGTTGTTCGGAAAGGAACATTCAAAATCATTCTCGAGCATTATGTTCGATTAGGCGCGTCTGTGAGTCAATTCAAGACACCTAGATGTATTGGTCCTGCAAACAAGGAAGTGATGCAAATATTGTTTGCAAATGTTGTTAAGAACTATTTTAGTTTTGCATACAAATGA 1728 0.3594 MIEKVEKLDMEKVIENFERLTKDAEKVQRETLKRILEENASAEYLQNLGLNGRTDPESFKACVPLVIYKDLEPYINRMVGGDVSPILTGKPITGISLSSGTSQGKQKFIPWNDELFETTVQIYQTSFAFRNRDFPIQNGKALGFIYSSKSSQTKGGVTAATATANVFKNPGYKHVMEALKSPSVSPDEVIFSPDFHQTLYCHLLCGLLFREEVQIVSSTFAYSIVYAFRAFEQVFEELVNDIKQGVLSNRVTHQSIRTAMSKLLKPNPELANLIHKKCTGLSNWYGLIPELFPNVKYIQGIMTGSMEAYLKKLRHYAGDVPLLTSEYGSSEGWIASNVNPKVAPEFATYAILPQIAYFEFIPLTQLDGNEVELKPVGLTDVKIGEEYEIVLTNPAGLYRYRLGDAVKVMGFYNSTPEIKFLRRNNLLLTINIDKNTENDLQLSVETASELLAKEKMEVIDYTSYIDLSKEPGRYVIFWEISGEANDKLLSECCTCLDKSFVDLGYISSRKSKGIGALELRVVRKGTFKIILEHYVRLGASVSQFKTPRCIGPANKEVMQILFANVVKNYFSFAYK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00959 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 574 IPR004993 -
Tsu08g00959 575 Coils Coil 10 30 - -
Tsu08g00959 575 Pfam GH3 auxin-responsive promoter 17 550 IPR004993 -
Tsu08g00959 575 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00959 Tsu-Chr8 10530873 10534629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00959 9 571 EF-hand Containing Proteins AT1G23160 39.168 1.00e-138 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00959 K14506 - gmx:100813492 879.782