Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00956 ATGGATGAATCAGCTAAGCATAGGTTGGTGAGGTGTCCTAAATGTCAAAATGTTCTTCATGAACAAGCTAGTTATTCTGTTTATCAATGTGGTGGTTGTGGAACTGTTCTTAGAGGAAAGGTTAATAATGGTAATGGTAGTTTGTGGGAGGCATCAGATGAGGGACAGGGTGGAAGAGTTCTTTCTAAATCAGGAAATTCATTCAGGAAAGATGTAGGTTTTGTGAGTGATAATAATTTAGATGTTGATGTTAAGTCCAACGGTGCCTTCTCGAGGGAGGATCAAAGGGATTCCGAGAGATTGAGCAAGGAGCGTGAGAGGATTTTGAATCGTTCTCTTGATGGTAGTGACAAAGGACTTTCGGAGAACAGTTATGATGTTGGTAAAAGTAAAGGTGAAGAGGGTAAAGCAATAAGAAGGGAACGCCATGAACCAAAATTTCAAGTTGGAGGGTCGAATTTCCCGAGGAGAATGTCTAATTGGCCAAACGAGGAGAGAGTTGACATGGAAGCTGTGAGATTTTCCACATTGAATTATCCTGATGAGGGAACTTCAAGATTTTCTTATAATCATGGTGAACAATGGAATAATTATAAAGACATGGATGGTATGAGCAGGGTTCGGCACCTCGAGCAAGATCGAGCCGAGCTTCTAAGGAAGCTTGACGAGTTATCAAAGCAGCTGAGCAATTCTTCTGAAATGGTTAATAATCCTAAAGAAAAGGGTCATCCTGATTCAAACATGGTTCCTCCAGGTCCTCGCAGTGGCCCTGATACTCGGTTTCCAGATGGACCTTCTGGGTCAAACCGGACGGCCTCAAGGCAATTCTTTGGTCCTAATACAAATGTGGCAGGTCCTCCTTATTTTAATTATCATCATGATCCATATGGTTATACTAGTGGTCCTGAAATGTCCATGCACAACTTCCACCCTTCGATGCATAACCCTAACTATATTCCTGGATATGGAGATCCTTTCGTATCGCAAATGATGAGAGGTCCACACCATCCATTATCCCACCAATTCCCGCAACAACCGATGCATCCCTACTTTCCTGGACACTATGCTGATACCGGTCTAGATTCATATGAACAATATGCACATAATCCTATGCCGCACCCGCCTTCTTGCTCTTGTTTTCATTgctacaacaacaaaagaagaGGTGCGATGCCAGCACCGCCTGCTACGTTCCTTAACAGCAGATTCCCTCATACCTCAAATGATCCTATATTAAACCGTCGTGATATCCCAGTTGGTCAACGTGTTCATAATTCTAGAACTGCTATTCCGGCTGCAAATTCTCATGAAAAACAATTACATTCAAGATTGGCTAGTGACTTCGATTCGGAAAGGGGTGGATTTGTCGCGAGCCGTTCTCAGAAAGTAATGCCAGCTAGCGGTAGTAGTCAGCGGTGCCATCCTATAGCAGGTGGTTCTCCTTTCATCACATGTTATAATTGCTTCGAGTTATTGCAACTTCCTAAAAAAGTACTGGTTAAGGTGAAGATTCGTAAGCAGAAAATGAGATGTGGAGCTTGTTCTTCTGAAATAAATATCTCTGTCGTAAACAAGAAGCTAGTTACTTCTCCTCATGCGGAAATGGAAGAAACTACCACAAGGATTGATGATGCTTCTGTCGAGGTTGTGAATAGCCATGTGTCACATTCTCGTGGTCATGTGAACACAAATGGTGTTAACTTCTCATCCGATGATTATTCTGGTTTTGATTTTCACTCAGTAGATAGAGAATCTCCTGTTATGGCTTCAGACCCGAGTTTGAACTCTAGCAAGCTGCAGGGGATGCAGAGTTTCCATTCTTCATCTCCGAGTACCTCAGAGGATGAAAATAGTCCAGATGAAAAGAGTCCAGAAGAAATAACTACACCAGGAGAAGCCGCTAACTCAATTCAGCCGACTAAAGCCTCGGTGTTGTCTCCACCTGCCGGCTCGCCACTTCAAGAATATCTTGATTATTCTAGTAACAATAACCATGCAGTGAATCGGTTTGGGAAAGGCAACCAAAGTGGTCGCTCAGAACAAGAGAAGCCGGTGAAACTAGAAAAGAATACCTCAAGGCAAAATTCTTTGAAAGAGGTAGTGCTTGCATCTGAGATGGATGTCAATGATTATTCAAACTCCGGGATTTCACAGGATTATGCCGATACAAGCCGAGAAGACGACCGTAGTAGATCAAGCAAAGGAGGTGAATCGTTTTTcgcaaacattttcaaaaaaggTTCCCGGGGTTCTTCCCAAACTGACAAAGTCGACGATCGTGAAAATTGTGTTGTTACCGTAAATGGACAACCCTTATCAGACCGCGTGGTTAAGAAAGCTGAAAAGTTAGCTGGACCAATCCAGCCAGGAAATTACTGGTACGATTCTCGGGCTGGATTTTGGGGTGTCATCGGTGGACCTTGTCGTGGAATAATTCCGCCATTCATAGAAGAGTTCAATTATCCTATTCCTGATAAATGTGCCGGTGGAAACACCGGCGTTTTTGTAAACGGGAGAGAACTTCACCAAAAGGATTTAGACTTGCTTTCTCGTAGAGGACTTCCAACTGATAGCGATAGATCTTATATCGTTGAAATTACCGGGAGAGTCTTGGATGTAGACACAGGTGAAGAGCTAGATGGCCTCGGCAAACTTGCGCCAACGGTGGAGAAAGCAAAGCATGGATTTGGCATGAAAGTACCAAGAGCAGCAGCTGCATGA 2721 0.4282 MDESAKHRLVRCPKCQNVLHEQASYSVYQCGGCGTVLRGKVNNGNGSLWEASDEGQGGRVLSKSGNSFRKDVGFVSDNNLDVDVKSNGAFSREDQRDSERLSKERERILNRSLDGSDKGLSENSYDVGKSKGEEGKAIRRERHEPKFQVGGSNFPRRMSNWPNEERVDMEAVRFSTLNYPDEGTSRFSYNHGEQWNNYKDMDGMSRVRHLEQDRAELLRKLDELSKQLSNSSEMVNNPKEKGHPDSNMVPPGPRSGPDTRFPDGPSGSNRTASRQFFGPNTNVAGPPYFNYHHDPYGYTSGPEMSMHNFHPSMHNPNYIPGYGDPFVSQMMRGPHHPLSHQFPQQPMHPYFPGHYADTGLDSYEQYAHNPMPHPPSCSCFHCYNNKRRGAMPAPPATFLNSRFPHTSNDPILNRRDIPVGQRVHNSRTAIPAANSHEKQLHSRLASDFDSERGGFVASRSQKVMPASGSSQRCHPIAGGSPFITCYNCFELLQLPKKVLVKVKIRKQKMRCGACSSEINISVVNKKLVTSPHAEMEETTTRIDDASVEVVNSHVSHSRGHVNTNGVNFSSDDYSGFDFHSVDRESPVMASDPSLNSSKLQGMQSFHSSSPSTSEDENSPDEKSPEEITTPGEAANSIQPTKASVLSPPAGSPLQEYLDYSSNNNHAVNRFGKGNQSGRSEQEKPVKLEKNTSRQNSLKEVVLASEMDVNDYSNSGISQDYADTSREDDRSRSSKGGESFFANIFKKGSRGSSQTDKVDDRENCVVTVNGQPLSDRVVKKAEKLAGPIQPGNYWYDSRAGFWGVIGGPCRGIIPPFIEEFNYPIPDKCAGGNTGVFVNGRELHQKDLDLLSRRGLPTDSDRSYIVEITGRVLDVDTGEELDGLGKLAPTVEKAKHGFGMKVPRAAAA 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00956 906 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 903 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 228 280 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 87 135 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 711 736 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 87 113 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 655 678 - -
Tsu08g00956 906 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 903 IPR040244 GO:1900150
Tsu08g00956 906 Pfam Probable zinc-ribbon domain 477 522 IPR021480 -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 262 280 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 585 697 - -
Tsu08g00956 906 Coils Coil 207 234 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 679 693 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 629 647 - -
Tsu08g00956 906 MobiDBLite consensus disorder prediction 589 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00956 Tsu-Chr8 10469854 10474379 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00956 - - aprc:113849738 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00956 08 10469854 10474379 Tsu08g00956 08 10469854 10474379 ECH