Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00955 ATGGTGAAAAACAGAGCTGAAAATTTGAGCTCATTGTTTTCACTTCAAAATCATAATcttttttgtgtaaaatttgCAGCATCAATTTTCTTGGTGGGTCTTGCTTTTCGTCTTGTTTTTTGGGATTCATTGAGTTCTTCATCATTTGTAGAGATACAAaaaccttcttcttctcctatTCCACCTCAAATAGAGACAGAAACAGAGTCCTCTGTTTTCTCTTCTCCACTTGAAGCACCAAAATATGATGAGTTTCAAGTGAGGAACAAGAGTGAAGCCTCTTTGAATgTTGCAGAAAAATGTGATTTGTTTGTGGGAGATTGGGTGTCTGATCAATCTTATCCAATATACACAAATGAGAGTTGTCATGTGATTGAACCTCATCAAAATTGCATGAAAAATGGACGGCCAGATTTAGGGTACCTTTATTGGAGGTGGACACCAAAAGAGTGTGAATTACCAAAGTTCAACCCAAAGAAGTTTCTTAATCTCATGAGAAATAAAGCAATGTCCTTTATTGGTGATTCTATCTCACGCAACCATGTTCAATCCCTACTTTGCATTCTCTCACAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCCTTCTCATAACTTCACACTCTCAGTAATATGGACACCTTTCCTTGTCAAAGCAGCTATTTATGAAGACATGAATGGAGTTTCATCTTCAATGGTACAACTTCATCTTGATACTCTTGACCAACTATGGACCAAACAATTCAACACTTTTGATTATGTTGTAATTGGTGGTGGAAAATGGTTTCTCAAATCTTCAATATATCATGAAAACAACACTATATCTGGCTGCCATTACTGTCCTGGAAAGAATTTAACCGATCTAGGGTTCGACTACGCGTACCGCAAAGCTTTACAACTTGTTTTTAACTTCTTTACAAATTCTAGCCATAATGCAACTGTTTTGTTTAGAACTACAACACCAgatcattttgaaaatggtGAATGGTTTAGTGGAGGGTATTGTAATAGAACTATACCCTTCAAAGAGGGTGAAATTGATATGATAGATGTAGATTCTATCATGAGAGGTATTGAAGTTGATGAGTTTGAGAAGGCTATTACATCATTAGGATCTGAGAAAAGGGTAAACTTGAAACTTTTGGACACAACTTTTCTTTCATTGCTGAGACCAGATGGACATCCAGGACCTTACAGACAGTTCCAACCATTTGCAAAAGATAAGAATGCTAAAGTTCAGAATGATTGCTTGCATTGGTGTTTACCAGGACCAATTGATTCATGGAATGATATAGTAATGGAAATGTTGATCAATGGTTAA 1350 0.3496 MVKNRAENLSSLFSLQNHNLFCVKFAASIFLVGLAFRLVFWDSLSSSSFVEIQKPSSSPIPPQIETETESSVFSSPLEAPKYDEFQVRNKSEASLNVAEKCDLFVGDWVSDQSYPIYTNESCHVIEPHQNCMKNGRPDLGYLYWRWTPKECELPKFNPKKFLNLMRNKAMSFIGDSISRNHVQSLLCILSQVEPAVEIYHDKEYRSKIWKFPSHNFTLSVIWTPFLVKAAIYEDMNGVSSSMVQLHLDTLDQLWTKQFNTFDYVVIGGGKWFLKSSIYHENNTISGCHYCPGKNLTDLGFDYAYRKALQLVFNFFTNSSHNATVLFRTTTPDHFENGEWFSGGYCNRTIPFKEGEIDMIDVDSIMRGIEVDEFEKAITSLGSEKRVNLKLLDTTFLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIVMEMLING 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00955 449 Pfam PMR5 N terminal Domain 99 152 IPR025846 -
Tsu08g00955 449 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 71 447 - -
Tsu08g00955 449 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 153 445 IPR026057 GO:0016740
Tsu08g00955 449 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 71 447 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00955 Tsu-Chr8 10459908 10464363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00955 - - mtr:MTR_8g027900 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00955 08 10459908 10464363 Tsu08g00955 08 10459908 10464363 ECH
Tsu07g04670 07 51215396 51217224 Tsu08g00955 08 10459908 10464363 PCT