Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00942 ATGAATAACGGTGTTGAACAATTCAATCCTATTGAAACACAATACATAAGGAGACATCACAAACATGAATTAAGGGACAATCAGTGTTCCTCTACACTTGTCAAACACATCAAAGCCCCTGTTCAccttGTTTGGTCTTTGGTTAGAAGATTTGATCAGccacaaaaatataaaccattTGTTAGCAGATGTATTATGCAAGGTGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGTCTTCCAGCTACAACTAGTACTGAGAGATTGGAACAACTTGATGATGAAGAACATATTCTTGGTATTAGGATTGTTGGTGGTGACCATAGGCTAAGGAACTATTCATCAATAATCACCGTCCATCCAGAGGTTATTGACGGAAGACCGGGTACAATGGTGATTGAATCATTTGTTGTGGACGTGCCTGAAGGAAACACGAGGGACGAAACTTGTTACTTTGTGGAGGCGTTGATTAGGTGCAACCTAAGTTCTTTAGCCGATGTCTCAGAGAGGATGGCCGTGCAGGGTAGAACCGATCCTATTCCTATTAATATCAACGCATAA 573 0.3927 MNNGVEQFNPIETQYIRRHHKHELRDNQCSSTLVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPGTMVIESFVVDVPEGNTRDETCYFVEALIRCNLSSLADVSERMAVQGRTDPIPININA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00942 190 CDD PYR_PYL_RCAR_like 29 173 - -
Tsu08g00942 190 Gene3D - 3 182 IPR023393 -
Tsu08g00942 190 PANTHER - 10 183 - -
Tsu08g00942 190 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 10 183 - -
Tsu08g00942 190 Pfam Polyketide cyclase / dehydrase and lipid transport 29 173 IPR019587 -
Tsu08g00942 190 SUPERFAMILY Bet v1-like 29 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00942 Tsu-Chr8 10348810 10351428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00942 K14496 - gmx:100500065 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00942 08 10348810 10351428 Tsu08g00942 08 10348810 10351428 ECH