Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00933 ATGATACTCATAGGATTCATCATCTTTACAGCTACACTCATCACTGCCATAATCATCAAACTCAGTTTTTCTGCAATCACCGGTAGACGAAACAGAAAAACTGCGGTGGGTTTCTTCCATCCATACACCAACGATGGCGGCGGCGGAGAAAGAGTGCTATGGTGTGCTGTCAAAGCTATACAAGAAGAGAATCCTGATCTTCAATGCCTTGTTTATACTGGAGATCATGATGCTACACCTCAATCGTTGTTGAATCGTGCAATTGATCGCTTTGGTGTTAAGCTTCTATCCCCTCCTAAGGTGGTGCATTTGTACAAGAGAAAGTGGATTGAAGAAACGACTTATCCGCACTTTACTATGATTGGTCAAAGTTTAGGATCCATGTATCTCGGATGGGAAGCTTTGTGCAAGTTCACccctttatattattttgatacAAGTGGTTATGCTTTTACATATCCACTTGCTAGGTTGTTTGGATGCAAAGTTATTTGCTATACACATTATCCTACTATTAGTTCAGACATGCTATCTCGCGTTCGTCAACGCAGCTTGATGTATAATAATGATTCCTTGGTTGCCAAAAGTGTTTGGCTTTCTCGGTTCAAAATAGTCTATTACACATTCTTCAGCTGGTTGTATGGGATTGTTGGATCTTGTACACACCTAGCTATGGTCAATTCATCTTGGACCAAAGCCCATATTGAAAAGCTTTGGGGAGTTCCAGATCGGATTAAGCGAGTTTATCCTCCTTGTGATACTTCAGGACTTCAGGTGCTTCCTTTGGAAAGATCAGCTGAAATTCCTGTAATAATATCCGTTGCACAATTTCGACCAGAGAAGGCTCACAGTCTCCAACTTGAGGCCTTTTCACTTGCCATTAAGAGATTGGAGTCTGGCTTGCCGAAACCTAAACTCCAGTTTGTTGGTAGCTGTAGAAATAAATCAGATGACGAAAGACTGCAAAGGTTAAAAGAGAAAGCAATTGAGCTGAATGTGAATGAACAAGTGGAATTCCACAAGAATGTAACATACAAAGAATTGGTGGGACTTTTAGGCGGCGCTGTTTCCGGCATCCATTCAATGACAGATGAGCATTTTGGCATTAGTGTTGTAGAATATATGGCTGCTGGTGCCATCCCAATTGCTCATAATTCAGCCGGCCCAAAAATGGACATTGTACTGGATGAAGATGGACAGCAAACAGGGTTTCTTGCCTGCACTGTTGAAGAATATGCAGATGCCATTTTTAAAGTCATTAAGATGTCAGAAACGGAAAGACTAAATATGGCTGCTGCTGCAAGAAGACGAGCAAGCAGGTTTTCTGAGCAGCGATTTTGTGATGACTTCAAAGCCGCAGTACGCCCTATTATCAGTCGTGTTTCTAGATAA 1392 0.4124 MILIGFIIFTATLITAIIIKLSFSAITGRRNRKTAVGFFHPYTNDGGGGERVLWCAVKAIQEENPDLQCLVYTGDHDATPQSLLNRAIDRFGVKLLSPPKVVHLYKRKWIEETTYPHFTMIGQSLGSMYLGWEALCKFTPLYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLSRVRQRSLMYNNDSLVAKSVWLSRFKIVYYTFFSWLYGIVGSCTHLAMVNSSWTKAHIEKLWGVPDRIKRVYPPCDTSGLQVLPLERSAEIPVIISVAQFRPEKAHSLQLEAFSLAIKRLESGLPKPKLQFVGSCRNKSDDERLQRLKEKAIELNVNEQVEFHKNVTYKELVGLLGGAVSGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADAIFKVIKMSETERLNMAAAARRRASRFSEQRFCDDFKAAVRPIISRVSR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00933 463 Gene3D Glycogen Phosphorylase B; 257 441 - -
Tsu08g00933 463 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 38 457 - -
Tsu08g00933 463 Pfam ALG11 mannosyltransferase N-terminus 34 239 IPR031814 -
Tsu08g00933 463 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 10 458 IPR038013 GO:0004377
Tsu08g00933 463 Pfam Glycosyl transferases group 1 269 436 IPR001296 GO:0016757
Tsu08g00933 463 CDD GT4_ALG11-like 35 449 IPR038013 GO:0004377
Tsu08g00933 463 Coils Coil 314 334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00933 272 459 Glycosyltransferase AT1G78800 27.749 1.60e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00933 K03844 - gmx:100801617 783.097