Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00896 ATGGCAGGGGAGTATTGGCTGCAGGATCTTCAAGAAATTGAGCATGCCACTCTAGTGAGTGGAGGAGCTCCACCGCCAGCAGATGCATATACCATTAACAGTCATCCAGGCCCCAACTACAACTGCTCCATTAATGATGTATACCAACTTAATGTGATTCCAGGAAGGACCTACTTGTTAAGACTAATTAATGCTGGTTTAAACACCGAGAACTTCTTTGCCATTGCTAATCACAAATTAACGATCGTGGAAGCTGACGCTGAATACACGAAGCCATTCATCACAGACACAGTGATGCTTGGACCAGGCCAAACACTAAATGTCCTAGTCTCCGCTGATCAGCCAGTAGGAAAATACTCCATGGCTGTTGCACCTTACAAGTCTGGCAGGGTTGTCAAATATCAAAATGTTTCAGCCATTGCCTACTTCAACTATATAGGGGCCAAATCTAATGGTACATATTTACCGGCTAAATTACCTAAACTTGATGATAAGTTGGCTGTTAAGACAGTAATGGATGGATTAAGGAGCCTAAATCAAGTCAATGTGTTCAAAGAAACCGATAAAAACATATTCATCACCATTGGATTGAATGTTAAAAAATGCCACTCAAAGTCACCGAAGCAAAACTGTCAAGCCATGAATAATGGAGTGCTGACAGCTTCAATGAACAATATAAGTTTTGTTCATCCCCACATTTCAATCCTAGAAGCTTATTACAAGAAAATAAACGGATCATATACTGAAGATTTTCCCGATGCACCATCTAAGTTCTATGACTTCGTTAATGGAGCCCCTAATAACATTCCATATGACACGGAGTCATTGAATGGGACTAGAACTAAGGTCCTTGAATATGGTACCAAGGTACAACTCATTTTGCAGAACACAGGAACAGTCAACATTGAAAACCACCCAATTCACATCCATGGCTACAGCTTTTATGTTGTAGGGTATGGCACAGGCAACTATGATCCACTAACTGCACAATTCAATCTAGTGGATCCCCCATACATGAATACAATTGGAGTTCCAGTCGGTGGATGGGCAGCAGTACGCTTTGTAGCTGATAATCCAGGTGTATGGTATATGCACTGCCACATTGAGGTACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAGAATGGAAAAGGAGATATGGAGTCCTTACCACATCCACCACCAGATCTGCCCTCATGTTAA 1209 0.416 MAGEYWLQDLQEIEHATLVSGGAPPPADAYTINSHPGPNYNCSINDVYQLNVIPGRTYLLRLINAGLNTENFFAIANHKLTIVEADAEYTKPFITDTVMLGPGQTLNVLVSADQPVGKYSMAVAPYKSGRVVKYQNVSAIAYFNYIGAKSNGTYLPAKLPKLDDKLAVKTVMDGLRSLNQVNVFKETDKNIFITIGLNVKKCHSKSPKQNCQAMNNGVLTASMNNISFVHPHISILEAYYKKINGSYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTKVQLILQNTGTVNIENHPIHIHGYSFYVVGYGTGNYDPLTAQFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIEVHQSWGLGMVFIVKNGKGDMESLPHPPPDLPSC 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00896 402 Pfam Multicopper oxidase 3 147 IPR001117 -
Tsu08g00896 402 Pfam Multicopper oxidase 272 385 IPR011706 GO:0005507|GO:0016491
Tsu08g00896 402 Gene3D - 1 180 IPR008972 -
Tsu08g00896 402 ProSitePatterns Multicopper oxidases signature 2. 365 376 IPR002355 GO:0005507
Tsu08g00896 402 CDD CuRO_2_LCC_plant 3 145 IPR034285 -
Tsu08g00896 402 SUPERFAMILY Cupredoxins 186 402 IPR008972 -
Tsu08g00896 402 CDD CuRO_3_LCC_plant 247 385 IPR034289 GO:0005507
Tsu08g00896 402 PANTHER MULTI-COPPER OXIDASE 2 402 IPR045087 -
Tsu08g00896 402 Gene3D - 200 402 IPR008972 -
Tsu08g00896 402 PANTHER LACCASE-6 2 402 - -
Tsu08g00896 402 ProSitePatterns Multicopper oxidases signature 1. 360 380 IPR033138 -
Tsu08g00896 402 SUPERFAMILY Cupredoxins 3 147 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00896 Tsu-Chr8 9826191 9828569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00896 K05909 - gmx:100789406 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00896 08 9826191 9828569 Tsu08g00896 08 9826191 9828569 ECH