Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00883 ATGGCGGATTTGATGGGATCACGGGCATACTGCTGCTTCAAGTGCCAGAACCTTGTTGCTTTCCATGATGATATTGTTTCCAAAGATTTTCAGGCAAGTAATGGAAGAGCTTTTCTGTTTTCTCATGCTATGAACATATTTTTGGGACCTAAAGAAGATAGACAACTTATGACTGGTCTTCACACAGTTGCTGATGTTTATTGTTCTGATTGTGGTGAAGAACTTGGTTGGAAATACATTAAAGCTTATGAAGAAACACAGAAGTATAAAGAAGGAAAATGTGTGCTTGAGAAGTTCAAGATTGTTTTAGGAAATGGGTAG 321 0.3769 MADLMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIFLGPKEDRQLMTGLHTVADVYCSDCGEELGWKYIKAYEETQKYKEGKCVLEKFKIVLGNG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00883 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
Tsu08g00883 106 PANTHER PROTEIN YIPPEE-LIKE 3 103 - -
Tsu08g00883 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 3 103 IPR039058 -
Tsu08g00883 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00883 Tsu-Chr8 9658989 9660554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00883 - - gmx:100788878 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00883 08 9658989 9660554 Tsu08g00883 08 9658989 9660554 ECH