Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00844 ATGCCTCTTGTCGAGGAAGAGGTCCTGTTAAAGTGGATACAAGAGCTGTGTGATGTCATCCGTGCTCTGGAAGAACAAATGAGGGCTCTCATCCGAGAGCACAAATTGCTACTAGTTGGAGATTATACTCACTCATATCACTTCAAAAGGTCAAAGTACTTGGTTAGACCTCGTGATGAGTATTACAAACCTAATTCAGACGACAATACTCGAGACAGGGGACTTGGAGTTTGGGCAGCTAGCTACTACTTACAAACCAAAGTTCTCTTTCTGTTTCCTTtgAAACATTGTTTACTTTCAGTTTCACACATAGCATCTCAAACAAGGATCTTCTCAGTTCTCAGTTCTcacaaacacaacaacaacaaccttagTTCATTCACAAGTTTGTTTCCaacatttttttacttaattaacCAGgaGGAAAAGATGCAGCAGACACCGCAAATGATTCCTATGATGCCTTCATTCTCACAAACAAACATAACCACCGAACAGATTCAAAAATATCTTGACGAAAACAAGAAGCTGATTCTGGCAATATTGGACAACCAAAATCTTGGAAAACTCGCAGAATGTGCCCAGTACCAAGCTCAGCTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCGCAGCCACAAGCACCAGCCTTGCCACCACAGATGGCCCCGCACCCTGCGATGCAACAAGGATTCTATATGCAACATCCTCAAGCTGCAGCAATGGCTCAGCAACAAGGAATGTTCCCTCAAAAAATGCCAATGCAATTCGCTAATCCGCATCAAATGCAGGAtcaacagcagcagcaacagcagcagcagctACATCAGCAGGCTATGCAAGGTCAAATGGGGATTAGACCTGGAGGGATAAATAACGGCATGCATCAAATGCACAACGAGGCTGCTCTTGGAGGTGGTGGCAGTGGTGGTCCGAATGATGGACGTGGTGGTGGAAACAAGCAAGATGCTTCGGAAGCTGGCACAGCCGGTGGAGATGGTCAAGGAAGCTCTGTCGCCACCGCGCATAACAGTGGTGATGCTTCAGAAGAGGCAAAGTGA 1068 0.4213 MPLVEEEVLLKWIQELCDVIRALEEQMRALIREHKLLLVGDYTHSYHFKRSKYLVRPRDEYYKPNSDDNTRDRGLGVWAASYYLQTKVLFLFPLKHCLLSVSHIASQTRIFSVLSSHKHNNNNLSSFTSLFPTFFYLINQEEKMQQTPQMIPMMPSFSQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPALPPQMAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFANPHQMQDQQQQQQQQQLHQQAMQGQMGIRPGGINNGMHQMHNEAALGGGGSGGPNDGRGGGNKQDASEAGTAGGDGQGSSVATAHNSGDASEEAK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00844 355 Coils Coil 13 33 - -
Tsu08g00844 355 Pfam SSXT protein (N-terminal region) 161 216 IPR007726 -
Tsu08g00844 355 PANTHER BNAA09G51550D PROTEIN 144 328 - -
Tsu08g00844 355 MobiDBLite consensus disorder prediction 261 283 - -
Tsu08g00844 355 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 144 328 IPR044779 GO:0003713
Tsu08g00844 355 MobiDBLite consensus disorder prediction 333 347 - -
Tsu08g00844 355 MobiDBLite consensus disorder prediction 261 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00844 Tsu-Chr8 9184920 9190824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00844 - - vun:114167142 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00844 08 9184920 9190824 Tsu08g00844 08 9184920 9190824 ECH