Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00839 ATGTTGTTCTTATGCTTGAAGGGTATGTCACAAAAATCTTTCATTTCAATTCTTGTCCTTATTTTTTCCTCTGTTATTGTGCTATCTACACCCCCAGAAGATCCAATCAAATGTTTATCACAAAACACAACTTGCACAATCAGAAATTCCTATGGAATGTTTCCTGATAGAACAATATGTCAAGCTTCTCAAGCTCTATATCCAACTTCAGAACAAGAATTAATTTCAATGGTTGCATCAGCAAGtagtaaaaaaaccaaaatcaaagttACTACACGTTACTCACATAGTATACCAAAATTGGTATGTCTTGAAGATTCAAAAGGGTTATTAATAAGCACAAAATATCTCAACAAGGTAGTGAAAATTGATGtggaaaaaaatacaataactGTTGAAAGTGGTGTTACATTAAAGGACTTAATCAATGAAGCTTCAAAAAATGGTTTGGTTTTACCATATACACCCTATTGGTTTGGTTTAACAATTGGTGGATTAATTGGAACTGGTGCACATGGAAGCACATTGTGGAATAAGGGAAGTGCAGTTCATGATTATGTGATTGAGATTAGAATTGTTAGGCCTTCAAATTCTATAGATGGTTATGCTAAAGTTGAGATTCTTAATGAACAAAATAATGAAGATTTTGATGCTGCTAAAGTTTCACTTGGTGTTCTTGGTGTTGTTTCACAGGTGACCCTAAAACTAGAACCAATTTTCAAGCGATCAATCACTTATTTGGCAAAAAGTGATTCTGATTTGGGAGAACAAGTGGTTAGTTTTGGACATGAACATGAATTTGCAGATATAACTTGGTACCCAAGTCAAAGGAAGGCTATATATCGTGTTGATGATCGTGTCCCTATAAATACACCTGGCAATGGTCTCTATGAATTTATTCCTTTTCGTCCCACTCCTTCACTTGCACTTGCTGTCATAAGAACCACAGAGGATCTTGATGAATCCACCAGGAATGCTGATGGAAAGTGTAGAGTTGCAAAATTAACAACAGATACTCTCGTCGCTTCAGCTTATGGGCTTACAAACAATGGTATAATCTTTACTGGATACCCTGTAATTGGATTCCACAATCGTCTTCAATCATCTGGATCATGCTTAGATAGTCATCAAGATTTAAAGATAACAGCATGTGCTTGGGACTCAAGAATAAAAGGAGAGTTTTTTCATCAAACTACATTTAGAGTTAGTTTATCTATAGTGAAAAACTTTATTGAAGATATACAAAAGCTAGTTCAATTAGAACCTAAAGCATTATGTGGAATTGAACAATACAATGGAATTCTAATGCGTTATGTCACGGCTTCGAGTGCTTACTTAGGGAACCAAGACGAAGCATTAGACTTCGATTTCACATATTACCGTAGCAAAGATCCGATGGCTCCTAGGCTTTATGAAGACATTATTGAAGAGATTGAACAAATGGGGATTTTTAAATATGGAGGGTTACCTCATTGGGGTAAGAATAGGAATTTGGCTTTTGAAGGTGTTTTTAAGAAGTATAAAAATGTTGGAAAATTTTTGAAGGTTAAAGAGAAATTTGATTCACAAGGGCTTTTTTCTAGTACTTGGACTGATCAAATGCTTGGATTAAAAGAAGGTGTGACAATATTGAAAAATGGGTGTGCATTAGAAGGTTTGTGTATTTGTTCACAAGATAGTCATTGCAATCCAAGTAAAGGGTACTTTTGTACACAAGGTAAAGTTTATAAGGAAGCAAGGGTTTGTTCTCATGTGTGA 1758 0.343 MLFLCLKGMSQKSFISILVLIFSSVIVLSTPPEDPIKCLSQNTTCTIRNSYGMFPDRTICQASQALYPTSEQELISMVASASSKKTKIKVTTRYSHSIPKLVCLEDSKGLLISTKYLNKVVKIDVEKNTITVESGVTLKDLINEASKNGLVLPYTPYWFGLTIGGLIGTGAHGSTLWNKGSAVHDYVIEIRIVRPSNSIDGYAKVEILNEQNNEDFDAAKVSLGVLGVVSQVTLKLEPIFKRSITYLAKSDSDLGEQVVSFGHEHEFADITWYPSQRKAIYRVDDRVPINTPGNGLYEFIPFRPTPSLALAVIRTTEDLDESTRNADGKCRVAKLTTDTLVASAYGLTNNGIIFTGYPVIGFHNRLQSSGSCLDSHQDLKITACAWDSRIKGEFFHQTTFRVSLSIVKNFIEDIQKLVQLEPKALCGIEQYNGILMRYVTASSAYLGNQDEALDFDFTYYRSKDPMAPRLYEDIIEEIEQMGIFKYGGLPHWGKNRNLAFEGVFKKYKNVGKFLKVKEKFDSQGLFSSTWTDQMLGLKEGVTILKNGCALEGLCICSQDSHCNPSKGYFCTQGKVYKEARVCSHV 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00839 585 ProSiteProfiles PCMH-type FAD-binding domain profile. 58 239 IPR016166 GO:0071949
Tsu08g00839 585 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 31 582 IPR010030 -
Tsu08g00839 585 Pfam D-arabinono-1,4-lactone oxidase 433 533 IPR007173 GO:0003885|GO:0016020
Tsu08g00839 585 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 10 585 - -
Tsu08g00839 585 SUPERFAMILY FAD-binding/transporter-associated domain-like 55 238 IPR036318 GO:0050660
Tsu08g00839 585 Pfam FAD binding domain 65 195 IPR006094 GO:0050660
Tsu08g00839 585 Gene3D - 119 238 IPR016169 -
Tsu08g00839 585 PANTHER GULONOLACTONE OXIDASE 10 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00839 Tsu-Chr8 9120199 9131046 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00839 K00103 - gmx:100790483 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00839 08 9120199 9131046 Tsu08g00839 08 9120199 9131046 ECH
Tsu08g00839 08 9120199 9131046 Tsu08g00839 08 9120199 9131046 PCT