Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00815 ATGGGTAATTGTGTGTTCAAAGGCTTCCATCATGGAGATTTTGAAGACACGATGGTAAGAATTATAACATCAAATGGAGGCATCATGGAATTTTATTCTTCTATAACGGTTGAATGTATAACAAACGAGTTCCCACACCATGGAATTTTCAAAAACAACTGCAACACACTCTCTAAACCACTCTCGAAAAACGAGGAACTTCAAGGTGGGGAAGTTTACTATCTTCTCCCTCTCAAAAACATGACCAACAAACAATTTGGTGAAACATTCGAAACGTTAACTCCGTATCGAATGTCCACGTGTGACAAAAatagcagcaacaacaacaataatatatgGTCGGAACATGAAGTGTTTCCGAGATACAATAGTAGTGGGGTATGGAAGGTGAAGTTAGTGATTAGTCCAGAGAAATTGTCGGAGATTTTGTCTCAAGAGTCGAGGACTGAGGCGTTGATTGAGAGTGTAAGAACGGTGGCTAAGTGCGGTAATGGGATGCCATCCTCTGTGGCAAACTCCGATCAGTGGAGTTTGTCTAGTAGTTTTAAAGGTTCTATAGACAATTTTAATTTAGAATCTTCAAGTTCAAATTAG 594 0.3771 MGNCVFKGFHHGDFEDTMVRIITSNGGIMEFYSSITVECITNEFPHHGIFKNNCNTLSKPLSKNEELQGGEVYYLLPLKNMTNKQFGETFETLTPYRMSTCDKNSSNNNNNIWSEHEVFPRYNSSGVWKVKLVISPEKLSEILSQESRTEALIESVRTVAKCGNGMPSSVANSDQWSLSSSFKGSIDNFNLESSSSN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00815 197 Pfam PADRE domain 1 176 IPR025322 -
Tsu08g00815 197 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 181 - -
Tsu08g00815 197 PANTHER DUF4228 DOMAIN PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00815 Tsu-Chr8 8789081 8789763 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00815 - - lja:Lj3g3v2515210.1 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00815 08 8789081 8789763 Tsu08g00815 08 8789081 8789763 PCT