Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00813 atggcaACAGTGACTGCTTCAAGTAACATAGTATCGAGAATTTCTCATGTCAATATGTCAACTGTCTCGTGCGAGTCTAAAACGGCACCAATGAGAATTGGTTATATGAGGAAAGCTAATACTCATAATGGACTCAGAATTATGAATTCATTGGATGAGCTATTAAACAGAAACTCAATTAAAATGAAGGGAGTGCAATCAAGCTGGAAGAAGGGTCTTCTGAGAAAGAGTGTTAGGCCTAAAGGTATTATAATTTGTGGCTTGAATTTGATCTTTGTTGGAACTGAGGTTGCTCCATGGAGCAAAACTGGTGGTTTAGGTGATGTTCTAGGAGGTCTTCCACCAGCATTAGCAGCTAATGGGCACAGAGTTATGACAATTGCACCGCGCTATGATCAATACAAAGATGCTTGGGATACAAGTGTATCAATTGAGATAAAAGTAGGAGATAGAAAAGAAACAGTTCGCTTCTTCCATTGCTTTAAAAGAGGAGTTGATCGCGTCTTTGTAGATCACCCTATATTTCTCGAAAAGGTTTGGGGTAAAACTGGAACAAAAATCTATGGACCTGCGGCAGGAGATGATTACCAAGACAATCAACTACGTTTTAGCCTCTTCTGTCAGGCAGCTCTGGAAGCAGCAAGAGTTCTGAATCTCGAAagcaataaatatttttcaggACCATATGGCGAAGATGTCATTTTCGTCGCTAATGATTGGCACACCGCCCTTATCTCATGCTACTTGAAATCTATGTACCAATCAATTGGCCTCTTTAGGAATGCCAAAGTTGTTTTTTGTATCCACAACATTGCTTACCAAGGAAGATTTGCATTCGCCGACTATTCACTTCTCAATCTCCCTGACCAATTTAAAAGCTCCTTTGACTTCCTTGATGGACATGTTAAACCAGTTGTTGGAAGAAAAATCAATTGGATGAAAGCTGGAATATTGGAATCTCATTTGGTTTTAACTGTTAGTCCATACTATGCTCAAGAACTAGTGTCAGGCCCAGATAAAGGTGTCGAGTTGGACAACATTTTACGCCGAACTGGTGTTACTGGAATCGTAAATGGCATGGATGTTCAAGAGTGGAATCCATCCACTGACAAATACATAACTGTCAAATATGATGATTCGACAGTATTGGAAGGAAAGGCTCTTCTGAAAGAAGCACTCCAAGCAGAAGTTGGTTTGCCGGTTGACAAAAATATTCCTCTCATAGCTTTCATTGGAAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGCAGCCATTCCTCAATTTATTAAGGAGAATGTTCAGATAGTAGCCCTAGGAAcaggaaaaaaagaaatggaaaagcAACTTCAAGAACTTGAAATATCATACCCTGACAAGGCCAGAGGAGTTGCAAAATTCAATGTTCCCCTAGCTCACATGATAATTGGAGGAGCTGATTTTATATTGATTCCTAGTAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGAACTGTGCCTATTGTTGCCTCAACAGGTGGATTAGTGGACACGGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTTCCTTCAATGTTGAAtgTGATGCTGTGGATCCAGTTGATGTGGATGCTATTGCAAAGACTGTCATAAAGGCCCTTGCAGTCTATGGAACTCCAGCTTTTGCAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGTGAGTTAG 1737 0.3932 MATVTASSNIVSRISHVNMSTVSCESKTAPMRIGYMRKANTHNGLRIMNSLDELLNRNSIKMKGVQSSWKKGLLRKSVRPKGIIICGLNLIFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTSVSIEIKVGDRKETVRFFHCFKRGVDRVFVDHPIFLEKVWGKTGTKIYGPAAGDDYQDNQLRFSLFCQAALEAARVLNLESNKYFSGPYGEDVIFVANDWHTALISCYLKSMYQSIGLFRNAKVVFCIHNIAYQGRFAFADYSLLNLPDQFKSSFDFLDGHVKPVVGRKINWMKAGILESHLVLTVSPYYAQELVSGPDKGVELDNILRRTGVTGIVNGMDVQEWNPSTDKYITVKYDDSTVLEGKALLKEALQAEVGLPVDKNIPLIAFIGRLEEQKGSDILVAAIPQFIKENVQIVALGTGKKEMEKQLQELEISYPDKARGVAKFNVPLAHMIIGGADFILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDAVDPVDVDAIAKTVIKALAVYGTPAFAEMIKNCMAQDLSWKVS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00813 578 Pfam Glycosyl transferases group 1 402 527 IPR001296 GO:0016757
Tsu08g00813 578 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 1 576 - -
Tsu08g00813 578 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 576 - -
Tsu08g00813 578 Hamap Glycogen synthase [glgA]. 88 578 IPR011835 GO:0004373
Tsu08g00813 578 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 89 578 IPR011835 GO:0004373
Tsu08g00813 578 CDD GT5_Glycogen_synthase_DULL1-like 89 578 - -
Tsu08g00813 578 Gene3D Glycogen Phosphorylase B; 361 571 - -
Tsu08g00813 578 Pfam Starch synthase catalytic domain 90 349 IPR013534 -
Tsu08g00813 578 Gene3D Glycogen Phosphorylase B; 90 577 - -
Tsu08g00813 578 PANTHER GRANULE-BOUND STARCH SYNTHASE 1 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00813 Tsu-Chr8 8768340 8772870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00813 1 576 Glycosyltransferase AT1G32900 70.761 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00813 K13679 - gmx:100037476 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00813 08 8768340 8772870 Tsu08g00813 08 8768340 8772870 ECH