Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00811 atgtCTTTCACTGCAACAAAATTCTCACACTCTCTTCTTGCTGTTCCTATCAATTCTTCAACTCTTAGATCCAATGATAAACCACTTTCTTTCTCTACTGATCTCTTCAAAAACAATAACCCTTCTTCCTCTTTTCTTGGATCCACTCAAAAGCTTCTTCGTTTCAATGCTTTCAATAAGCCTTTATTTCATCGCCGTTCATCATCACCTTCTGCTGTTCTTCTTCAACAAACCTCAAATTTGCTTATTACAAAAGAAGAAGGGTTAGTGCTTTATGAAGACATGGTGTTAGGGAGATCCTTTGAAGACAAGTGCGCTGAGATGTATTATAGAGGTAAAATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAAGCTGTGTCAACTGGATTCATAAAGTATTTGAGGCAAGAAGATTGCATAGTGAGCACATACAGAGACCACGTTCATGCATTGAGCAAAGGGGTTCCTTCTCGAGCTGTGATGAGTGAACTATTTGGAAAGGCGACTGGATGCTGCCGAGGTCAAGGTGGTTCAATGCATATGTTCTCAAAAGAACACAACGTGCTTGGTGGTTTTGCATTCATCGGTGAAGGAATTCCAGTGGCAACTGGTGCAGCATTTTCCATGAAGTACAAAAGAGAGGTGTTGAATCAGGCAGATTCTGATAATGTTACGTTGGCATTTTTCGGAGATGGAACTTGTAATAATGGTCAGTTCTTTGAGTGCTTAAACATGGCAGCTTTGTGGAAATTGCCAATTGTGTTTGTGGTGGAAAATAATTTGTGGGCCATTGGGATGTCGCATATCAGGGCAACTTCAGATCCTGCGATATGGAAAAAGGGTCCAGCTTTCGGAATGCCGGGTGTTCACGTTGATGGGATGGATGTTTTGAAGGTCAGAGAGGTGGCGAAGGAAGCAATTGACAGGGCTAGAAGAGGAGAGGGACCAACTTTAGTGGAATGTGAGACTTATAGATTTAGAGGACATTCATTGGCTGATCCTGATGAGCTTCGTAACCCTGCTGAGAAGGAACACTATGCTGGTAGGGATCCAATCACTGCATTGAAGAAATACCTTTTCGAGAACAAATTAGCCACTGAACAAGAATTGAAGACAATAGACAAGAAAATTGATGAGATCCTTGAGGACGCTGTTGAATTTGCCGAAAAGAGTCCTCAACCACCTCGCAGCCAGCTTCTTGAGAATGTCTTTGCTGATCCAAAAGGTTTTGGAATCGGACCGGATGGAAGGTACAGATGTGAGGATCCAAAGTTTACAGAAGGCACCGCTCATGTCTAA 1302 0.4217 MSFTATKFSHSLLAVPINSSTLRSNDKPLSFSTDLFKNNNPSSSFLGSTQKLLRFNAFNKPLFHRRSSSPSAVLLQQTSNLLITKEEGLVLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKYLRQEDCIVSTYRDHVHALSKGVPSRAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSMKYKREVLNQADSDNVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHIRATSDPAIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPTLVECETYRFRGHSLADPDELRNPAEKEHYAGRDPITALKKYLFENKLATEQELKTIDKKIDEILEDAVEFAEKSPQPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00811 433 Gene3D - 55 414 - -
Tsu08g00811 433 CDD TPP_E1_PDC_ADC_BCADC 91 389 - -
Tsu08g00811 433 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 14 433 - -
Tsu08g00811 433 Pfam Dehydrogenase E1 component 94 395 IPR001017 GO:0016624
Tsu08g00811 433 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 14 433 - -
Tsu08g00811 433 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 86 406 IPR017597 GO:0004739|GO:0006086|GO:0043231
Tsu08g00811 433 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 78 408 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00811 Tsu-Chr8 8744692 8749051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00811 41 433 Acyl Lipid Metabolism Gene Families AT1G01090 81.454 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00811 K00161 - gmx:100811207 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00811 08 8744692 8749051 Tsu08g00811 08 8744692 8749051 ECH
Tsu08g00811 08 8744692 8749051 Tsu08g00811 08 8744692 8749051 PCT