Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00785 ATGAGTAAAGAGAACGAGAACAGTAAAGAAGTAGAAGAAAGTCGCGCAACTCCGCGCTTGAATGAAAGGATCCTGTCATCTTTGTCAAGGAGATCAGTTGCTGCTCATCCTTGGCATGATCTTGAAATTGGACCTGAAGCACCGAATATTTTCAACTGTGTTGTTGAGATCACTAAAGGAAGTAAGGTTAAATATGAACTTGACAAAAAGACTGGAATGATTAAGGTTGATCGTATTCTGTATTCATCCGTTGTTTATCCTCATAACTATGGTTTTATCCCTCGAACTCTTTGTGAAGACAATGATCCACTTGATGTCTTGGTTCTCATGCAGGAGCCGGTTCTTCCGGGTTGTTTCCTGCGAGCTCGGGCCATTGGACTGATGCCAATGATTGATCAGGGGGAGAAGGATGATAAAATCATTGCGGTATGCGCTGACGATCCTGAGTATAAGCACTATACTGACTATAAAGAACTTCAACCTCATCGTCTAATGGAGATTCGACGCTTCTTTGAAGACTACAAGAAAAATGAGAACAAGGAGGTAGCAGTTAATGAGTTTTTGCCACCATCCACTGCTGTTGAAGCCATCCAACACTCAATGGATCTTTATGCTGAGTATATTCTGCATACATTGAGGAGATAG 645 0.4171 MSKENENSKEVEESRATPRLNERILSSLSRRSVAAHPWHDLEIGPEAPNIFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDYKELQPHRLMEIRRFFEDYKKNENKEVAVNEFLPPSTAVEAIQHSMDLYAEYILHTLRR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00785 214 SUPERFAMILY Inorganic pyrophosphatase 30 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Tsu08g00785 214 Gene3D Inorganic pyrophosphatase 32 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Tsu08g00785 214 CDD pyrophosphatase 49 202 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Tsu08g00785 214 ProSitePatterns Inorganic pyrophosphatase signature. 100 106 - -
Tsu08g00785 214 PANTHER BNAC07G03580D PROTEIN 20 213 - -
Tsu08g00785 214 Hamap Inorganic pyrophosphatase [ppa]. 49 205 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Tsu08g00785 214 Pfam Inorganic pyrophosphatase 53 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Tsu08g00785 214 PANTHER INORGANIC PYROPHOSPHATASE 20 213 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00785 Tsu-Chr8 8404714 8407943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00785 K01507 - gmx:100500365 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00785 08 8404714 8407943 Tsu08g00785 08 8404714 8407943 PCT