Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00780 ATGGCGATAGGTGGAAAGAGGAAAAGGAACAACGATTCAGACGGCGAAGATGATTCTTCCAGAAGAAGAACCAGAACGGAGCCAGAAAAGGAGATCAAAGAGCCATTCCGCCCTTCCATGATTAAGAACAAGGAAAAACGATCGGAAGTTCATGCTAAAGTTAAGCACCAGAAGAAGCTCGAAAAACGCGCTAAAGCGAAGGCTCGTGATGCTGCTGTTAAGAGAGCTATCGAACTTGGTGAAGAGCCTCCGGAGAAGAAGGTGCCGCGTACGATTGAGAATACAAGGGAAGTAGATGAGACTGTTTGCAAGCCTGATGATGAAGagCTATTTGCTGGAAATGATGCTGATGAATTCAGTTCAGTTTTAAATAGGCAACATAATCCTAAGATATTAATCACCACTTGCCGCTTCAATTCTACGAGGGGACCTGCTTTTATATCTGAATTGCTTACGGTTATACCAAATGCACATTACTTCAAGAGAGGAACCTATGATTTAAAAAAGATTGTAGAATATGCAAATAAACAGGACTTCACTTCTCTAGTAGTTGTACACACCAATCGCAGAGAACCAAATGCTCTCTTAATTATTGGCTTACCTAATGGACCTACTGCTCATTTCAAACTCACAAATCTTGTTTTACGCAAGGATATTAAGAATCATGGAGTTCCAACCAGTCACCAGCCTGAGCTTGTGTTGAACAACTTCACAACACGTCTAGGGCATCGAGTTGGAAGAATGATACAGTCACTTTTCCCACAAGATCCAGAGTTTAAAGGACGACGTGTAGTCACCTTTCACAACCAGAGAGACTTCATATTCTTCCGGCATCATCGGTATATTTTTGAaaccaaagaaattaaaaagatCGAGTCTAAAGGTAAAAAAGACGAGGATGGCAAGAGTGAGAAGGTTCCTGACCACAAAACAATTGCCCGTCTTCAGGAATGCGGCCCTCGTTTCACATTGAAATTAGTTAGCCTGCAGCATGGTACATTTGACTCTAAAGGTGGAGAATATGAGTGGGTTCACAAGCCGGAAATGGACACAAGTCGAAGAAGGTTTTTCCTGTGA 1077 0.416 MAIGGKRKRNNDSDGEDDSSRRRTRTEPEKEIKEPFRPSMIKNKEKRSEVHAKVKHQKKLEKRAKAKARDAAVKRAIELGEEPPEKKVPRTIENTREVDETVCKPDDEELFAGNDADEFSSVLNRQHNPKILITTCRFNSTRGPAFISELLTVIPNAHYFKRGTYDLKKIVEYANKQDFTSLVVVHTNRREPNALLIIGLPNGPTAHFKLTNLVLRKDIKNHGVPTSHQPELVLNNFTTRLGHRVGRMIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEIKKIESKGKKDEDGKSEKVPDHKTIARLQECGPRFTLKLVSLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00780 358 SUPERFAMILY Class II aaRS ABD-related 128 332 - -
Tsu08g00780 358 ProSiteProfiles Brix domain profile. 129 335 IPR007109 GO:0006364|GO:0019843
Tsu08g00780 358 Pfam Brix domain 142 327 IPR007109 GO:0006364|GO:0019843
Tsu08g00780 358 SMART Brix_2 132 329 IPR007109 GO:0006364|GO:0019843
Tsu08g00780 358 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 31 358 IPR044281 GO:0006364|GO:0042134
Tsu08g00780 358 MobiDBLite consensus disorder prediction 7 50 - -
Tsu08g00780 358 MobiDBLite consensus disorder prediction 1 71 - -
Tsu08g00780 358 PANTHER RIBOSOME PRODUCTION FACTOR 1 31 358 - -
Tsu08g00780 358 Gene3D - 129 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00780 K14846 - gmx:100785331 563.148