Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00778 ATGGGTCTGAAAAATTTCATGATTTTTGTAGTGGTTTCATGGTTTTGTTCAATTCCTACTACATGTGTTTTGGCAGCAAAACAGAAGCAGACTCAGAATCAGAAGCTGAGgtttgatgaaaatggagaatTTAAGATATTGCAAGTGGCAGATATGCACTATGCAAATGGAAAAACCACACGTTGTTTGGATGTTCTTCCTTCACAAAAGGCTTCTTGTACTGATCTTAACACTACTGCTTTCATTCATAGGATGATCCTTGCTGAGAAGCCTAATCTTATTGTCTTCACTGGAGATAATATCTTTGGTGCTGATTCCTCGGATTCGGCTAAATCAATGGATGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTGTTTTAGGGAACCATGATCAAGAAGGAACACTCTCTAGGGAAGGTGTGATGAAATATATTGTTGGAATGAAAAACACTTTAGCTAAGCTCAATCCTCCGGAAGTACACATCATTGATGGTTTTGGGAACTATAACTTGGAAGTTGGTGGTGTTCAAGGTACTACTTTTGAAAACAAATCAGTTCTCAATCTATACTTTCTTGATAGTGGAGATTATTCCAAAGTTCCTGGGATCCATGGTTATGATTGGATCAAACCTTCACAGCAACTTTGGTTTGAGCGAACATCTGCGAAGCTTCGGAAAGCATACATAAAAGGACCAGTTCATCAGAAAGAATCAGCTCCTGGTCTTGCATATTTTCACATCCCACTTCCGGAATATGCAAGTTTtgattcatcaaatttcacaggTGTGAAATTGGAACCGAGTGGCAATGGCATTAGTTCGGCTTCAGTGAATTCTGGTTTCTTCACGACCTTGGTCGAAGCAGGAGATGTGAAGGCCGTTTTCGTTGGCCATGATCACCTCAATGATTTCTGCGGCAAGCTAATTGATATACAACTTTGTTATGCTGGAGGTTTCGGATACCATGCTTATGGAAAGGCAGGATGGTCTAGGAGAGCAAGAGTCGTGGTTGCTAGCTTGGAGAAGACGGACAAGGGAACTTGGGGAGATGTCAAGTCGATTAAATCATGGAAACGCCTCGATGATCAGCATCTCACTGGAATTGATGTTGAGGTCCTATGGAGCAAGAGCTTTCATGATTCTGAAATGCTTGATTTGAAGGCTCAGATGGTGCTAAAACGGGAAGAGAAAAACGAAATCACTAATTTGCACTTAAGTTCATAA 1236 0.3981 MGLKNFMIFVVVSWFCSIPTTCVLAAKQKQTQNQKLRFDENGEFKILQVADMHYANGKTTRCLDVLPSQKASCTDLNTTAFIHRMILAEKPNLIVFTGDNIFGADSSDSAKSMDAAFAPAIASNIPWVAVLGNHDQEGTLSREGVMKYIVGMKNTLAKLNPPEVHIIDGFGNYNLEVGGVQGTTFENKSVLNLYFLDSGDYSKVPGIHGYDWIKPSQQLWFERTSAKLRKAYIKGPVHQKESAPGLAYFHIPLPEYASFDSSNFTGVKLEPSGNGISSASVNSGFFTTLVEAGDVKAVFVGHDHLNDFCGKLIDIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTDKGTWGDVKSIKSWKRLDDQHLTGIDVEVLWSKSFHDSEMLDLKAQMVLKREEKNEITNLHLSS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00778 411 PANTHER - 10 382 - -
Tsu08g00778 411 PIRSF Ptase_At2g46880 2 378 IPR011230 -
Tsu08g00778 411 SUPERFAMILY Metallo-dependent phosphatases 42 353 IPR029052 -
Tsu08g00778 411 Pfam Calcineurin-like phosphoesterase 44 305 IPR004843 GO:0016787
Tsu08g00778 411 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 10 382 - -
Tsu08g00778 411 CDD MPP_Dcr2 42 329 - -
Tsu08g00778 411 Gene3D - 42 349 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00778 Tsu-Chr8 8258413 8262439 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00778 - - gmx:100794167 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00778 08 8258413 8262439 Tsu08g00778 08 8258413 8262439 ECH
Tsu08g00778 08 8258413 8262439 Tsu08g00778 08 8258413 8262439 PCT