Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00745 ATGCTTATTTTACGTTCTCATCTCTGTCAGGTTCTTGCTTTATGTGACCATCCAGCTCTTTTGGACAAAAGTGAGACACAGGGTTTGTTCAGTGCTGATTCAATAGAGCGAGCTTGGCAGATTGTGGATCAGATTCCTGGGAGAGCAACCGGTGCCTATAGTCATAGTCAGGGTATTCAGGGTTTACGTGAAACAATAGCTGCTGGAATTGGAGAGCGTGATGGTTTTCCTTGTAATGCCGATGACATTTTCTTGACAGATGGCGCAAGCCCAGCAgTCCATATGATGATGCAATTACTTACTAGATCAGAGAAAGATGGAATTTTGTGTCCCATCCCTCAGTATCCTCTTTACTCAGCCTCAATTACTCTCCATGGTGGCCACCTGGTACCTTATTATCTAGACGAAGCAACTGGTTGGGGACTAGAAATATCTGAAGTCAAGAAGCAGTTGGAAGATGCCAAGTCCAAGGGCATCAATGTTAGGGCTTTAGTTGTCATAAATCCCGGAAATCCAACAGGGCAGGTTCTCGCCGAGGAAAATCAACGAGCTATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTTTATCAAGAAAACGTTTATGTTCCCGAGAAGAAATTCCACTCATTCAAGAAGGTATCTCGATCCATGGGATATGGCGACAATGATATCTGCTTAGTGTCTTTTCAGTCCGTCTCCAAAGGCTATCATGGGGAGTGTGGAAAACGAGGAGGTTACATGGAGGTGACTGGGTTTTCTCCAGATGTGAGAGAACAGATTTATAAAGTGGCATCCGTGAATCTTTGTTCCAACATCACTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCGCCTAAGGTTGGAGACGAGTCCTACGAGTCATTTATGGCCGAGAAGAATGCTATTTTATCTTCCCTCACCAAGCGTGCAAAGTCACTGGAAGAAGCTTTAAACAAACTAGAGGGCGTAACCTGCAACAAAGCTGAAGGAGCAATGTATTTGTTTCCTCGGATCCGCCTGCCTGAAAAAGCTATCAAAGCTGCAGAAGCTGAAAAGACAGCACCGGATGCCTTCTATTGCAAACGCTTGCTTAATGCCACAGGAGTTGTTGTCGTCCCTGGTTCTGGTTTTGGACAGGTACCTGGCACATGGCATTTTAGGTGCACCATATTGCCTCAAGAAGATAGAATTCCGGCCATCGTCACCCGCTTGACAGAGTTTCACGAGAAGTTCATGAACGAGTTTCGTGATTGA 1272 0.4473 MLILRSHLCQVLALCDHPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRETIAAGIGERDGFPCNADDIFLTDGASPAVHMMMQLLTRSEKDGILCPIPQYPLYSASITLHGGHLVPYYLDEATGWGLEISEVKKQLEDAKSKGINVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGDNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQILASLIMSPPKVGDESYESFMAEKNAILSSLTKRAKSLEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKTAPDAFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHEKFMNEFRD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00745 423 SUPERFAMILY PLP-dependent transferases 37 413 IPR015424 -
Tsu08g00745 423 Coils Coil 302 329 - -
Tsu08g00745 423 Gene3D - 51 297 IPR015421 GO:0003824
Tsu08g00745 423 PANTHER ALANINE AMINOTRANSFERASE 2 9 422 - -
Tsu08g00745 423 PANTHER ALANINE AMINOTRANSFERASE 9 422 IPR045088 GO:0008483
Tsu08g00745 423 Pfam Aminotransferase class I and II 48 398 IPR004839 GO:0009058|GO:0030170
Tsu08g00745 423 Gene3D - 8 50 - -
Tsu08g00745 423 Gene3D Aspartate Aminotransferase, domain 1 298 421 IPR015422 GO:0003824
Tsu08g00745 423 CDD AAT_like 36 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00745 Tsu-Chr8 7880686 7885822 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00745 K00814 - gmx:100776235 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00745 08 7880686 7885822 Tsu08g00745 08 7880686 7885822 ECH