Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00741 ATGAGTGCTGCTAGTTTTTCTAAGATTGTCATGGAACATATGCTTTTATCTTCCTTCAGGAGtgatgaggaggaggaggaggaggatgagTATAGTGCATATCCGTCGGATTCTGATACGAGGCAATATCCTCAAGTGAATAGCTACTATGGACAAGCTGTGCTTGATGGGATAAGCAACATTGATGGCTCACAGAAAGTGCATCCCGATGGAGAAAATATTGATGCAAAACTCTCTTCAAATTACAATTTTGATGCAGGGGGCTTGGAAGGAACACCAGTTATTGCAAAAAATGAAGATGAGCATGATATCTGTGATGAACATGAAGCACCTTCCTCGTTATATGTTTCAGAGGATGTTGATGCTGAACctgttgattttgaaaataatggacTCCTGTGGCTCCCTCCAGAaccagaagatgaagaagatgatcgGGAAGCGATTTTGTttgatgacgatgatgatgatgggaATGACACTGGAGAGTGGAGTTACAAGCGCAATTCAAGTAGTTTTGGAAGTGGGGAGCATCGACACAAAGATAGGTCAAATGAGGAGCACAAGAAGGTAATGAAGACTGTAGTTGATGGACACTTTAGGGCTTTGGTATCACAGCTGTTGCAGGTTGAGAACCTACCAGTTGAAGACAATAACAAAAACAGTTGGTTGGAAATAATCATATCTCTGTCATGGGAAGCTGCTAATTTACTAAAACCAGATATGAGCAAAGGCGGAGGGATGGACCCGGCTGGTTATTCGAAAGTCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGACGTCAAAGGTAGATAAACCTCGCATGTTGGTCCTTGGAGGGGCTCTTGAATATCAGCGTGTTACCAATCTTTTGTCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAAATGGCAGTGGCAAGGATAGCTTCACACAAACCAAATATCCTTCTGGTAGAGAAATCAGTTTCTCGATATGCACAGGAGTATCTTCTTGCAAAGGACATAACACTGGTTCTGAATGTAAAGAGACCTCTTTTAGAGCGCATAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTTTCATCACAAAAGTTGGGTTACTGTGAAATATTTCATGTAGAAAAGTTTGCTGAAGACCTAACTCATGTTAGTCAGGGTGGGAAAAAAACAGTCAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTAGGTTGCACGATTTTACTTAGAGGAGCTGACATTGATGAATTGAAAAAGGTGAAGCATGTGGTTCAGTATGCAGTTTTTGCAGCTTACCATTTGGCGATGGAGACATCTTTTCTTGCTGATGAAGGAGTCTCCCTACCAGAACTTCCACTAAACAGTCTGGCCCTTCCAAATAAGTCATCATCTATTCAAAGGTCCATCTCAACAGTTCCTGGTTTTACTGTTCCTGGCAATGAAAAGCCCGAGGTTCTTGAAGACGCTGGACCACGGAGAACCAAAAGTGTCGCAGTTGCTGAACTAGCCTCATCAATTTGCAATACAGGCTCCTTATCTAATGGTTCTTCTCGATCACTGCCACCTGGAACATCTCATGATGATTCAAGTATCTTGTACTCCTCCATTGTTGGCTCAGGAAATGACAGTCCCGAGTTGTACCATAATAAGCTTCTTTCCAAACAACCTCTGGTGAAAGAAACTTCTGTGGTGGATAACACTCCGGTAGTCATGGATGACCCCTTTGCAAATGATTCTGATACTGCAGAGAAAATATATCAAGGTATTTTAGCTGGAAAATCTCAAAATGATCATAGCCAAATATACACAAATCAATTAAGTGGTTCAGAGTCGTTATCTCCAAATCATGCTCAAAACCATATTGAGCAGATTGTAATCACAAATGAAGAACCAGTTCCTCAAAAAGAAGAGTTTCCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCATTGTCCTCGAGGTGTGTATGGAAGGGAACTGTGTGTGAGAGGTCCCATCTATTTCGAATTAAATACTATGGAAGCTTTGACAAACCATTGGGTCGGTTTCTGCGAGACCATTTATTTGATCAGAGTTATCGATGCCATTCTTGTGATATGCCATCAGAAGCACATGTGCATTGTTATACTCATCGGCAGGGAACACTTACCATATCAGTCAAGAGATTACCAGAAATTATCCTTCCTGGTGAAAGGGAGGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAGTGGCTTTCCTCCTGCCACACAGAGAATAGTAATGTCTGATGCTGCTTGGGGTTTATCATTTGGAAAGTTTTTGGAGCTCAGTTTCTCAAACCATGCTGCTGCCAGCAGGGTGGCAAGCTGTGGCCATTCTCTACACAGAGACTGTCTTCGTTTTTATGGATTTGGACAAATGGTTGCATGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCACACAAACTGATTTTTGATTATGGGAATCTGGATTGGATACAAAAAGAATCAAACGAGATGGTCAACCGGGCAGAGCTTTTATTCTCCGAAGTACTCAATGGTCTTAGTCAAATTGGAGAGAAAAGATCTGGTGCACCCCAAAGCAGTAGTGGCCATAAGACACCTGAATTAAGACGCCAAATTGCTGACCTGGAAGGGATGTTGCAAAGGGAGAAACTGGAATTTGAGGAAACTCTTAAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAGCCTGGGATTGACATTCTGGAAATTAATCGATTGTGGAGGCAGTTACTTTTCCAATCATATATGTGGGATCACCGCCTTATTTATGCAGACAGCATAGCTAATTCCAATAATGAATCTGATCAAAGCAGTCCAATTTCAGAGGATAAGGAAATACCTAATGATGAAAACGTGGCGACTGCGGTCTCGTTGGCAGGAAGGGGATTCAGTAGTGCCGACTCTATTCATGGAGTAGTTGATGCCAAAAGTTCTCAGTCAGATGCATTTCATCAAGAAGTTGACATGGTAAAAAATAAGCAAAACGAGAAAGAAGACGAACATAATCTTTCAAACAGCAAAAGCACAGATGATCATTCTGACCTTTTAGAACCTGAATTGGGTGTTCGAAGAGCCCTCTCTGAGGGACCATTTCCTGTCGTACCTTGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGAAAATCAAAAGGATAGCACATTTGTACACCCTGATTTATCTATAGCAGATGCTTTGACGCCCACTATACAAAGAGAAACATACTATCTTGGGGATCGCACAGAAGACCAGAGCAGCTCCAAGAGTTTCTTTTCTGCTCCTAAAGGTCACGATAATATAGAAGACTCTTTAAGCTGGTTAGGAGTGCCCTTTGTAAACTTCTATCGCCAATTTAACAAGAATTTGTTTTCTAGTAGCCAGAAGATTGAAACACTAGCGGACTACAATCCTGTTTTTGTATCATCCTTCGGGAAGCTGGAACTCCAAGGTGGGGCAAGGATGCTTCTGCCAATCGGTGTTAATGACACTGTAATTCCAATATATGATGATGAACCCTCGAGTATTATAGCTTATGCCTTGATGTTACCGGAGTATCATTCCCAATTATCTGACGAAGGAGAGAGATCGAAAGACGTATCTGACTTGGCATCATCTTTTTTTACCGACTCTGGTGCCTTCCATTCGTTTTCATCTGCCGATGAAACAGCTTTTGATTCTCAGAAAAGTTTTGGTTCGATCGACGATATGATATTGTCCATGTCTGGGTCTCGTAACTCGTCAATGTTGGACACATTGTCTTACAGTAAAGCTATGCATGCCAGAGTTTCCTTCGGAGAAGACGGTCCCCTTGGAAAGGTAAAATATTCTGTGACTGGTTACTATGCGAAGCGATTTGAAGCCTTAAGAAGAGTCTGTTGTCCTTCAGAGCTCGACTACATAAGGTCTCTAAGCCGCTGTAAGAAGTGGAGAGCTCAAGGTGGGAAGAGTAATGTATTCtttgcaaaaaccttggatgaTCGATTTATCATCAAACAAGTTACCAAAACAGAACTTGAATCGTTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGAACAGGAAGTCCAACATGTCTGGCAAAGATTCTTGGCATATACCAGGTTACGTCAAAGCATCTTAAAGGAGGAGGTAAAGAGACAAGAATGGATGTTTTGGTTATGGAGAATCTTCTATATAGGAGGACCGTGACACGACTTTACGATCTCAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACAGGGAAAAACAAAGTTCTACTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCTATTTTTGTGGGAAACAAAGCAAAACGATTGTTAGAAAGAGCGGTCTGGAACGATACTGGTTTTCTTGCGTCAATTGATGTAATGGACTATTCATTACTAGTTGGAGTGGATGAAGAAAAGCATGAGTTAGTTCTCGGAATAATTGATTTCATGAGGCAGTATACATGGGACAAGCATCTTGAAACATGGGTGAAAGCTTCAGGAATCCTCGGAGGACCAAAGAACACATCACCAACAGTTATATCACCAAAACAATACAAGAAAAGGTTCAGGAAAGCAATGACAACTTATTTTCTCATGCTTCCAGATCAGTGGTCTCCACCATCTATTATACCTAGTAATTCTCAGTCTGATAtaggtgaagaaaaagaaaacaatacaTAG 4845 0.4031 MSAASFSKIVMEHMLLSSFRSDEEEEEEDEYSAYPSDSDTRQYPQVNSYYGQAVLDGISNIDGSQKVHPDGENIDAKLSSNYNFDAGGLEGTPVIAKNEDEHDICDEHEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDDREAILFDDDDDDGNDTGEWSYKRNSSSFGSGEHRHKDRSNEEHKKVMKTVVDGHFRALVSQLLQVENLPVEDNNKNSWLEIIISLSWEAANLLKPDMSKGGGMDPAGYSKVKCIACGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRMLVLGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVARIASHKPNILLVEKSVSRYAQEYLLAKDITLVLNVKRPLLERIARCTGTQIVPSIDHLSSQKLGYCEIFHVEKFAEDLTHVSQGGKKTVKTLMFFEGCPKPLGCTILLRGADIDELKKVKHVVQYAVFAAYHLAMETSFLADEGVSLPELPLNSLALPNKSSSIQRSISTVPGFTVPGNEKPEVLEDAGPRRTKSVAVAELASSICNTGSLSNGSSRSLPPGTSHDDSSILYSSIVGSGNDSPELYHNKLLSKQPLVKETSVVDNTPVVMDDPFANDSDTAEKIYQGILAGKSQNDHSQIYTNQLSGSESLSPNHAQNHIEQIVITNEEPVPQKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCDMPSEAHVHCYTHRQGTLTISVKRLPEIILPGEREGKIWMWHRCLRCPRISGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGQMVACFRYASIDVHSVYLPPHKLIFDYGNLDWIQKESNEMVNRAELLFSEVLNGLSQIGEKRSGAPQSSSGHKTPELRRQIADLEGMLQREKLEFEETLKKILNQEKRNGQPGIDILEINRLWRQLLFQSYMWDHRLIYADSIANSNNESDQSSPISEDKEIPNDENVATAVSLAGRGFSSADSIHGVVDAKSSQSDAFHQEVDMVKNKQNEKEDEHNLSNSKSTDDHSDLLEPELGVRRALSEGPFPVVPCLSDTLDAKWTGENQKDSTFVHPDLSIADALTPTIQRETYYLGDRTEDQSSSKSFFSAPKGHDNIEDSLSWLGVPFVNFYRQFNKNLFSSSQKIETLADYNPVFVSSFGKLELQGGARMLLPIGVNDTVIPIYDDEPSSIIAYALMLPEYHSQLSDEGERSKDVSDLASSFFTDSGAFHSFSSADETAFDSQKSFGSIDDMILSMSGSRNSSMLDTLSYSKAMHARVSFGEDGPLGKVKYSVTGYYAKRFEALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGGKETRMDVLVMENLLYRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASIDVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSIIPSNSQSDIGEEKENNT 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00741 1614 Coils Coil 913 940 - -
Tsu08g00741 1614 MobiDBLite consensus disorder prediction 173 187 - -
Tsu08g00741 1614 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 22 1607 - -
Tsu08g00741 1614 MobiDBLite consensus disorder prediction 150 187 - -
Tsu08g00741 1614 SMART PIPK_2 1294 1586 IPR002498 GO:0016307|GO:0046488
Tsu08g00741 1614 MobiDBLite consensus disorder prediction 1041 1062 - -
Tsu08g00741 1614 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1607 - -
Tsu08g00741 1614 CDD PIPKc_PIKfyve 1321 1585 IPR044769 GO:0000285
Tsu08g00741 1614 CDD Fab1_TCP 201 472 - -
Tsu08g00741 1614 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1281 1442 IPR027484 -
Tsu08g00741 1614 Gene3D GroEL 266 438 IPR027409 -
Tsu08g00741 1614 MobiDBLite consensus disorder prediction 17 44 - -
Tsu08g00741 1614 Gene3D - 1444 1586 - -
Tsu08g00741 1614 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1359 1527 IPR002498 GO:0016307|GO:0046488
Tsu08g00741 1614 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1260 1585 IPR002498 GO:0016307|GO:0046488
Tsu08g00741 1614 SUPERFAMILY GroEL apical domain-like 266 438 IPR027409 -
Tsu08g00741 1614 SUPERFAMILY SAICAR synthase-like 1319 1585 - -
Tsu08g00741 1614 Pfam TCP-1/cpn60 chaperonin family 207 465 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00741 Tsu-Chr8 7839879 7850533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00741 16 1609 EF-hand Containing Proteins AT3G14270 60.862 0.0 1861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00741 K00921 - gmx:100819364 2568.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00741 08 7839879 7850533 Tsu08g00741 08 7839879 7850533 ECH