Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00740 ATGGGAAAAGTTCATCCCCAAGCTATAGTTTCATCTCCTATTTACAATATCACTtcaaagcaagagactttcacTCTATGGATGAAATCTCTTGTATTGAATGGAAAAGGATGTACAGTCTTTGATTCCAATGGTCAAATTGCATATAGAGTTGATAACTATAACTCTAATCATAGAGATCAAGTTCATCTCATGGATCAAAGAGGAAATACTTTGTTTACTATACTTAAAAAGCAATATAAATTGTCTAGGTTTTGGGAGGGTTACAAACTTCCGGCGACAAGGAATGATCGGAAAGGACCAAGTTTTCGAGTTTCTAAAACTTATAGCATCTCTAAATGGGATTCAACTTATGAAGTTGaacttggattggacaaaaataaaccatataattacaaaataaaaagaagtgcTTGCAAATCATCTTACAAAATATCTGACAAGTTTGGAGTGATAATTGCTGAgCTAAAGAGAAAGAAGTCAAGTTGTGGAATTGATTTAGGAGATGATGTTTTCACAATGGTGGTGGAACCAAATATTGATCTTTCTCTAATTATGGGAGTTGTTGTAGCTTACAAccttataaaaagtaaaatgtaa 600 0.285 MGKVHPQAIVSSPIYNITSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNSNHRDQVHLMDQRGNTLFTILKKQYKLSRFWEGYKLPATRNDRKGPSFRVSKTYSISKWDSTYEVELGLDKNKPYNYKIKRSACKSSYKISDKFGVIIAELKRKKSSCGIDLGDDVFTMVVEPNIDLSLIMGVVVAYNLIKSKM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00740 199 Pfam LURP-one-related 17 190 IPR007612 -
Tsu08g00740 199 Gene3D - 9 198 IPR038595 -
Tsu08g00740 199 PANTHER - 2 198 IPR007612 -
Tsu08g00740 199 PANTHER PROTEIN LURP-ONE-RELATED 11 2 198 - -
Tsu08g00740 199 SUPERFAMILY Tubby C-terminal domain-like 17 195 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00740 Tsu-Chr8 7830531 7831817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00740 - - gmx:100527543 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00740 08 7830531 7831817 Tsu08g00740 08 7830531 7831817 ECH