Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00727 ATGAAGTTCACCACAAGCTCTATTTTCTTCAATGTTTTTCTCATTATAGCTTTTGTGTTTCAAAGTACTTTTGCAAGCAAAATCGATTATAGAAGCAACAAGTACAAAGCCTTATTCATTTTTGGGGATTCTTACTTAGATGCTGGCAATAACAATTACATAAACACCACAACCCTTGATCAAGCAAATTTCTTGCCATATGGAGAAACCTATTTCAAGTTTCCAACTGGTAGATTCTCTGATGGTCGTTTGATATCAGATTTTATTGctGAATATGCAAATATTCCACTAGTTCCACCATTTCTACAACCTGGCTATGACAAATACTACAATGGAGTGAATTTTGCTTCTGGTGGAGCAGGTGCACTTGTTCAAACTTTCCAAGGGTCGGTAATACCTTTCAAAACACAAGCAAGAAACTTCAAGAAAGTAAGAACTTGGTTGAGGCACAAGCTAGGAAGTTCTAATTCCAAAACATTGTTATCAAATGCTGTCTACATGTTTAGCGTCGGATCGAATGATTATCTTAGTCCAATCTTGACAAATTCTAATGTTCTAAAGTATTATTCTCATTCAGAATATGTTAGCATGGTTGTTGGTAACTTCACTTCCACTATCAAGGAAATACATAAGAGTGGGGCTAGAAAATTTGCAATCTTGAACTTACCACCATTGGGTTGTCTTCCAGGAACTAGAATAATTCAATCACAAGGGAAAGGTAGCTGCTTAAAAGAGCTTTCATCACTTGCAAGTATACATAATCAAGCTCTTTATGTAACTCTCTTAGAATTGGAGAAACAATTAAGGGGCTTCAAATTTTCTCTCTATGATTTGAACTCTGACATCACTCAAATGATCAACCATCCCTTAAAATATGGTTTGAAGGAAGGAAAATCAGCATGTTGTGGGAGTGGACCATTTAGAGGAAAATATAGTTGTGGTGGAAAAAGAGGAGAGAAACACTTTGAATTATGTGACAAACCAAATGAACATTTATTTTGGGATTCTTACCATCTTACAGAAAATGCTTACAAACAATTGGCAGCTCGAATGTGGGATCATACTGGAAATTTTCACACTATTGGTAACTATACTATCAGTGATTTCTTCCAATAA 1116 0.353 MKFTTSSIFFNVFLIIAFVFQSTFASKIDYRSNKYKALFIFGDSYLDAGNNNYINTTTLDQANFLPYGETYFKFPTGRFSDGRLISDFIAEYANIPLVPPFLQPGYDKYYNGVNFASGGAGALVQTFQGSVIPFKTQARNFKKVRTWLRHKLGSSNSKTLLSNAVYMFSVGSNDYLSPILTNSNVLKYYSHSEYVSMVVGNFTSTIKEIHKSGARKFAILNLPPLGCLPGTRIIQSQGKGSCLKELSSLASIHNQALYVTLLELEKQLRGFKFSLYDLNSDITQMINHPLKYGLKEGKSACCGSGPFRGKYSCGGKRGEKHFELCDKPNEHLFWDSYHLTENAYKQLAARMWDHTGNFHTIGNYTISDFFQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00727 371 CDD SGNH_plant_lipase_like 37 353 IPR035669 -
Tsu08g00727 371 PANTHER GDSL ESTERASE/LIPASE 5 3 371 - -
Tsu08g00727 371 Gene3D SGNH hydrolase 25 356 IPR036514 -
Tsu08g00727 371 Pfam GDSL-like Lipase/Acylhydrolase 38 349 IPR001087 GO:0016788
Tsu08g00727 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 371 IPR044552 -
Tsu08g00727 371 SUPERFAMILY SGNH hydrolase 38 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00727 Tsu-Chr8 7711366 7715857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00727 37 353 Acyl Lipid Metabolism Gene Families AT4G10950 30.960 9.30e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00727 - - gmx:100819379 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00727 08 7711366 7715857 Tsu08g00727 08 7711366 7715857 ECH
Tsu08g00727 08 7711366 7715857 Tsu08g00727 08 7711366 7715857 PCT