Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00719 ATGGCAAAATCCAATTCCGACAAACCATCAAAAAACATAGAAGACATCAACCTCCTCCAATCCGAGGTAGCTTCTTTCGCTTCTTCTCTTGGTTTATCCACTTCCCAACCCAATTCTGGTTTCAACGATGTCGATTTTCGCAAAACCAAACCAAAGAAAACACCTGAAAAAACCACATCCCAGAATACCCAGAAgccaaaaaacaaaacttttagcAAAAACAATGAACCCCATGAAAAACCCAAATCAAAAcccgaaccaaaacaaaaacccaACTCAAAACCCGAACCAAAACCCAAACCTCCTGTTTTGTCATTGAAAGATGGTAATAAGGATAAAGGGTATAATAACAAGTTTAAGAATCTTCCAAAGCTTCCTTTGATTAAGGCAAATGCTCTAGGTGTATGGTTTGAGGATGCTGATGAGCTTGAAGGGAAGGTGATTGGGGAAGGGAAGAAGGTGGAGATGAAGAATTTGGATGAGTGGAAGAGGTTTGTGGAGAAAAAGAGGGAATTGGGTGAGAGATTGATGGCACAATTTGCTCAAGATTATGAATCTACTAGAGGAAGAAGTGGTGATATTAAGATGTTGATTTCTACTCAGAGGTCTGGTACTGCTGCTGATAAAGTTTCTGCATTTTCTGTTTTGGTTGGTGATAATCCTGTTGCAAATTTGAGGTCTCTTGATGCTCTTTTGGGAATGGTGACATCCAAGGTTGGAAAGCGTCATGCCTTGTCAGGTTTTGAAGCACTTCAAGAATTATTTATTGCAAGCTTATTACCAGATCGTAAGTTGAAGACTCTGATGCAAAGGCCGCTAAATCACATTCCTGAAAATAAAGATGGTTACTCCCTTCTGCTTTTCTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAACGATTTATTGGCGCACTTGAAGAAGCATCCCGAGACATGCTACCTGCTTTGAAAAACAAGTCATTAAAGACCATATTTGTGCTACTGAGTAGGAAGTCGGAGCAAGAGCGCAAACTACTTACTGCACTTGTTAATAAAcTCGGGGATCCAGATAATAAGGCAGCATCTAATGCCGACTATCACTTGACCAACCTTTTGTCTCAGCACCCAAATATGAAgGCCGTGGTTGTTAATGAGGTGGATACTTTTCTCTTTCGGCCTCATTTATCACCGCGTTCACAGTACCATGCGGTTAACTTTTTGAGCCAAATTCGTCTCACCAATAAAGGAGATGGCCCAAAAGTGGCGAAACGCCTCATCGATGTATATTTTGGACTGTTTAAGGTTTTGATCACTGGCCCAAGCAGCAATGAGAAGAACGATAAACACGGTAAGGAAAAtccaaaagagaaaaattcagaAGGGCATTCAGATTCACACGCAGAAATGGACTCCAGGCTTCTATCAGTTCTCTTGACGGGAGTGAATAGAGCATTTCCTTTTGTCTCAAGTAATGAAGCCGATGACATTGTTGATGTTCAAACACCAGTACTTTTCCAATTGGTTcattcaaaaaatttcaatgttgGAGTTCAAGCACTTATGCTTCTTGATAAAATTTCATCCAAGAATCAGATAGCCAGTGATCGATTTTACCGTGCTTTGTACTCCAAACTCCTTCTTCCAGCTGCCATGAATACATCCAAGGCAGAAATGTTTATTGCACTTATTCTAAGAGCAATGAAAAGGGATGTTAATTTAAAGCGAGTTGCTGCATTTTCTAAACGTCTACTGCAGATTGCACTTCAGCAACCACCACAATATGCCTGTGCATGCCTTTTCCTTCTGTCTGAACTCTTTAAAGCCAGACCACCATTATGGAACATGGCGTTGCAGAACGAGTCTCTTGATGATGAACTTGAACACTTTGAAGATGTTATAGAAGAAACTGATAAGGAACCTGTAATTGTATCAGATAAGGAACCTGCAACTTTGTCAGATAAACCAAGTGATGATATTGTACCAGTTCAGAATGGTGAGGTTGCCAATTCTAACAAAGATTCTTCTGAcggtgaagatgatgatgatcaaCCAGCATCTtctgaagaagatgatgatgatgatgatgatcaacCAGCATCttctgaagatgatgatgatgttgatttaGATGATGCCTTAGAGGATGAAGATTTTTCACTTGCAAAGAGTAAAAATAATcataagaaatcaaaaaaatcaaatactgAAATTGAAGGTCAGAAATCGCAGGAATCTATCAAAAAGCCTTTGTTGCCTGGAGGTTATGATCCACGTCACCGAGAGCCGTCTTATTGCAATGCAGACCATGTAAGTTGGTGGGAGTTACTGGTGCTTGCTTCACATGCACATCCTTCAGTTTCCACCATGGCAAGAACTCTTCTTTCTGGAGCCAACATTGTCTATAACGGAAACCCGTTAAGCGACCTCTCTTTAACAGCTTTCCTTGACAAATTCATGgagaaaaaaccaaaacaaagcACTTGGCATGGTGGTTCTCAGATTGAACCTGTCAAGCAGCTGGATGTTAACAACCTCTTGGTTGGGTCAGAGATTCTAGCACTAGCTGAAGCAGATGTACCACCAGAGGATCTAGTCTTTCATAAATTCTATACAAACAAAAAGAGTTCATCTTCaaaaccaaagaaaaagaagaagaaatcaactgATGATGAGGATGTTGATGATTATTTTGGTGCTGATGCTGATGATGTTGATGGTGGTGATGAAAGTGATAATGAAGAGATTGAGGATCTCTTGGATTCTGCTGATCCTACATTAGGACCAGATGGtgattttgattatgatgatttagatAAAGTAGCcaatgaggatgatgatgatttgattggtgatgatgtTAGTGATGCAGACATAGATATAGATATACCCTCAGATATAGAATTGGATGATGCTGATGATACTCCATTTGCTGATGATGATAGTGATGATAACAATGATATTCAGATAGGTGATATGGATGATGCCTCAGATGATGTTGAGGATCATCaagttgacaaaagaaaaaggaaacgTAAAACTGGTGGCAAAGGTGTTTCTCCATTTGCAAGTTATGAAGAGTTTGAGCATATACTGGAAGATGATGATGCTACTGAGAAAAAACCTTctaaggataaaaacaaatccaaaagaaaaaagatggaAGATGATGAACCAACTGAGAAAAAACCTTctaaggataaaaacaaatccaagaaaagaaaaaagaagtcaGCTCAATGA 3222 0.3523 MAKSNSDKPSKNIEDINLLQSEVASFASSLGLSTSQPNSGFNDVDFRKTKPKKTPEKTTSQNTQKPKNKTFSKNNEPHEKPKSKPEPKQKPNSKPEPKPKPPVLSLKDGNKDKGYNNKFKNLPKLPLIKANALGVWFEDADELEGKVIGEGKKVEMKNLDEWKRFVEKKRELGERLMAQFAQDYESTRGRSGDIKMLISTQRSGTAADKVSAFSVLVGDNPVANLRSLDALLGMVTSKVGKRHALSGFEALQELFIASLLPDRKLKTLMQRPLNHIPENKDGYSLLLFWYWEECLKQRYERFIGALEEASRDMLPALKNKSLKTIFVLLSRKSEQERKLLTALVNKLGDPDNKAASNADYHLTNLLSQHPNMKAVVVNEVDTFLFRPHLSPRSQYHAVNFLSQIRLTNKGDGPKVAKRLIDVYFGLFKVLITGPSSNEKNDKHGKENPKEKNSEGHSDSHAEMDSRLLSVLLTGVNRAFPFVSSNEADDIVDVQTPVLFQLVHSKNFNVGVQALMLLDKISSKNQIASDRFYRALYSKLLLPAAMNTSKAEMFIALILRAMKRDVNLKRVAAFSKRLLQIALQQPPQYACACLFLLSELFKARPPLWNMALQNESLDDELEHFEDVIEETDKEPVIVSDKEPATLSDKPSDDIVPVQNGEVANSNKDSSDGEDDDDQPASSEEDDDDDDDQPASSEDDDDVDLDDALEDEDFSLAKSKNNHKKSKKSNTEIEGQKSQESIKKPLLPGGYDPRHREPSYCNADHVSWWELLVLASHAHPSVSTMARTLLSGANIVYNGNPLSDLSLTAFLDKFMEKKPKQSTWHGGSQIEPVKQLDVNNLLVGSEILALAEADVPPEDLVFHKFYTNKKSSSSKPKKKKKKSTDDEDVDDYFGADADDVDGGDESDNEEIEDLLDSADPTLGPDGDFDYDDLDKVANEDDDDLIGDDVSDADIDIDIPSDIELDDADDTPFADDDSDDNNDIQIGDMDDASDDVEDHQVDKRKRKRKTGGKGVSPFASYEEFEHILEDDDATEKKPSKDKNKSKRKKMEDDEPTEKKPSKDKNKSKKRKKKSAQ 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 29 43 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 1027 1059 - -
Tsu08g00719 1073 Coils Coil 613 633 - -
Tsu08g00719 1073 SUPERFAMILY ARM repeat 293 717 IPR016024 -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 710 737 - -
Tsu08g00719 1073 Pfam CBF/Mak21 family 511 784 IPR005612 -
Tsu08g00719 1073 PANTHER CCAAT-BINDING FACTOR-RELATED 709 1034 IPR040155 -
Tsu08g00719 1073 PANTHER CCAAT-BINDING FACTOR-RELATED 14 640 IPR040155 -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 56 70 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 71 95 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 930 992 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 435 460 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 438 460 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 29 118 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 887 914 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 868 1073 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 669 709 - -
Tsu08g00719 1073 MobiDBLite consensus disorder prediction 628 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00719 Tsu-Chr8 7646471 7654285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00719 K14832 - gmx:100802669 1366.67