Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00718 atgaGTTTGTTTGACATGGATTTGAGTGGTGTAGTCAATAATTTGTTCAACCATGTTCATGAAACTTCTTCTAGGGATCATGAGAATCATGAGAGTAGAAAATCTTCTAGTATCCCAGTTGACATTTTGGATACTCCTAAGGAGTATATGTTTTTCTTGGATGTTCCCGGTCTCTCCAAGTCCGAAATTCAGGTGACAGTTGAAGATGAGAACACACTTGTGATAAAGAGCAATGGAAAAAGGAAACGCCAAGAAGGTGAAGATGAAGGATGCAAGTACCTTAGGCTGGAGAGAAGAGCACCTCAGAAATTATTGAGGAAGTTCCGTTTACCAGAGAATGCTAATGTGTCAGCAATAACAGCTAAATGTGAGAATGGTGTTCTGACTGTTGTTGTAGAGAAGCATACTCCACctccaaaatcaaaaacagTTGAAGTTGCAATTGCCTAA 450 0.3778 MSLFDMDLSGVVNNLFNHVHETSSRDHENHESRKSSSIPVDILDTPKEYMFFLDVPGLSKSEIQVTVEDENTLVIKSNGKRKRQEGEDEGCKYLRLERRAPQKLLRKFRLPENANVSAITAKCENGVLTVVVEKHTPPPKSKTVEVAIA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00718 149 CDD ACD_sHsps-like 41 134 - -
Tsu08g00718 149 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 18 149 - -
Tsu08g00718 149 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 31 149 IPR002068 -
Tsu08g00718 149 SUPERFAMILY HSP20-like chaperones 29 141 IPR008978 -
Tsu08g00718 149 Pfam Hsp20/alpha crystallin family 41 146 IPR002068 -
Tsu08g00718 149 Gene3D - 3 148 IPR008978 -
Tsu08g00718 149 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 18 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00718 Tsu-Chr8 7644994 7645775 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00718 K13993 - gmx:100803161 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00718 08 7644994 7645775 Tsu08g00718 08 7644994 7645775 ECH