Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00697 ATGGACGACGACGAAATGGCAATGGATTCTCCTTTCTTCGATCCTCAAGACCTCACCACTCGAGAGAAGTTCCGCAGATACGGGAAGAGGCATTTAAATTCAGGTGCTTCAGTCGAGCAAGATTATTCGGCTTCTAAGTTAAGTGAAAGTGGGCTGTTTTATGATGGACAAAACATCCATAGTCCTACTAATGCTGCACTTATTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCCGATTACTTGGATGAGAAGTCTTTGTATTCATCAAGAAAGAGGTTATCTGCTGATATTCCTGGAATTCCTGGCATGGAGGATGGTTTTGACTCTGTACGTTATTCGTTAAAGGCTTGCAAGCAAGAAGGCGACTCGTTGGGAGATGATGCAGACaatatctttaatttgtttGCTTCTCTGTTTGATTCCTCTTTGACAGGAATGATGCCTATTCCTGATCTGATACTAAGATTTGAAAATGAGTGTCGAAATGTTTCAGAGTCTATCAGGTATGGTTTGAACATAAGGCATCGAGTTGTTGAGGACAAATTAATGAGGCAGAGGGCTCAGCACCTGCTTGATGAGGCGGCAACATGGTCTCTCTTGTGGTTCCTTTATGGGAAAGGAAATTATCGCTATCCTTGGGTGAAAGAAACATCACATGTAGTGGCTTGTGAGTTTGTTATGGAGGACCATATAGCTCAATTGTGCCTCAGGATAGTCCAGTGGTTAGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGCAAAGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCAAGCAGTGGTGTTTGGCATCATACTCAACGTTACCTAAAGAAAGGAACTTCTGATAGAAACCTTGTTCATCACCTGGACTTTGATGCTCCAACTCGCGAAAATGCAAATGTTTTGCCCGATGACAAAAAACAAGATGAATCTCTTCTAGAGGATGTATGGACTCTTCTAAGGGCTGGAAGACTAGAAGAGGCGTGTGGACTTTGCCGATCTGCTGGACAGCCATGGAGAgcttcctctctgtgtccttttggaGGTTTGGACCTGTTTCCTTCGGTTGAAGCTCTGATGAAGAATGGTAAAAATAGGACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAGTGGGCTTCCTATTGTGCATCAGAGAAAATAGCAGAGCTAGGTGGGAAATATGAAGCAGCTGTGTATGCAGCCCAATGCAGCAACCTCAAACGGATGCTTCCGCTCTGTGCAGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAGGTAGACTTGGAAGTCACTCGTTCACTGCCAGGAGGAGGTGATCAACATAGAACTTTTGGAGATGTAATTGACCGAAGTCCTGGACAAGTTGATGGTTCCTTTGATCCTTCAAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAACAACCACGACAACTTTCATCTCTTCTGCAAAAACTTCATTCAGGGGAAATGATCCATGAAACTGTTACACGGCAATGTAAGGAGCAACAACGACAAATTCAGATGAGCTTAATGCTAGCGGACATACCACATGTACTAGACCTTATATGGTCATGGATAGCACCTTTGGAGGACGATCAAAATGTATTTAgGCCTCACGGAGATCCTCAGATGATACGATTTGGTGCACATCTAGTCCTTGTGCTTCGATATTTACTTCGCGAGGAGATGGAGGCTGTTTTCAGAGACAAGATTCTGAGCGTTGGTGATAATATTTTACACCTgtaTGCCCAATTTCTGTTTTCAAAGGAGCATGAGGAGTTGGTAGGCATATATGCTTCTCAGCTTGCACGTCACCGTTGCATAGACCTCTTTGTTCACATGATGGAACTTAGGCTTCACAGCAGCGTGCATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTGCCATTTTCTTCGATGGACGAATCAAAGGGTAGTTTTGAAGAGATTATTGAGAGAGTTTTGTTGAGATCTCGAGAGGTCAAGATTGGCAAATATGATAACCAGTCAGATGTTGCAGAACAGCACAGACTGCAGAGTCTTGAAAAGGCTAAAGTCATCCAGTGGCTTTGCTTCACACCACCATCAACAATTACTAATGTCAAAGATGTTAGCAAAAAACTTCTTCTTCAAGCATTGGAACATAGCAATGTGCTCTTCAGGGAGTTTGCCTTGATTTCTATGTGGAGAGTACCGGCAATGCCTATAGGTGCCCACACAGCTCTTGGTTTTCTTGCTGAGCCCTTGAAACAACTTGCAGAGACTATTGAGACCTCCGAGGATCATAATGTTTTTGAGGATCTGAGGGAGGTCGAAGAATGGCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTTAAAATTGAATTGGAGAATGCAGAAGTTCCTGTCTCTGAATTGTCACTAGAGGAAAAGGAAAGGGCTATTTCGGCAGCCAAGGAAACACTGACTGCGTCTCTTTCACTGCTAGAAAGAAGAGAAACACAGTGGCTCGCTTCTACTGATAATATATATGAATCAGCTGAACCTGTTTTCCTTGAACTTCATGCAACTGCAATGCTGTGCCTGCCATCTGGAGATTGTTTGTGTCCAGATGCTACTGTATGCACCACACTGACGAGTGCCCTCTACGCTTCTGTTGGTGACGAGGTTGTCTCAAATCGACAGCTAATGGTGAAAGTGTCTATATCTTCAAGGGACAATTATTGCATTGATATTGTTCTTCGTTGCTCAGCAATATTTGATGATGGACTTGGACCACATGATATCAATGATGGTGGAATTCTTAGCACCATCTTGGCTGCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAGGCTGGAGTTACCATGGAAATATCCCGATTGGATGCTTGGTATTCCAATAAAGATGGCATCCTAGAGTTCCCTGCAACATACATTGTGAAAGGACTTTGTCGCAGGTGCTGTCTCCCAGAAGTCATTCTTCGCTGCATGCAAGTTTCTGTTTCTCTCATGGGATCAGGAGTCCAGCCAGATTCCCACGATAACTTGATTGAACTGGTCGGCAGTCCTGAAACTCGCTTTCTTGACTTGTTCAGTCAACAACAATTACAGGAGTTTTTATTGATGGAGAGGGAATACTCAATCTGCAAAATGGAGCATACACATGAATGA 3228 0.4287 MDDDEMAMDSPFFDPQDLTTREKFRRYGKRHLNSGASVEQDYSASKLSESGLFYDGQNIHSPTNAALILENIKQEVESLDADYLDEKSLYSSRKRLSADIPGIPGMEDGFDSVRYSLKACKQEGDSLGDDADNIFNLFASLFDSSLTGMMPIPDLILRFENECRNVSESIRYGLNIRHRVVEDKLMRQRAQHLLDEAATWSLLWFLYGKGNYRYPWVKETSHVVACEFVMEDHIAQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYLPSSGVWHHTQRYLKKGTSDRNLVHHLDFDAPTRENANVLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSLCPFGGLDLFPSVEALMKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAELGGKYEAAVYAAQCSNLKRMLPLCADWESACWAMAKSWLDVQVDLEVTRSLPGGGDQHRTFGDVIDRSPGQVDGSFDPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHETVTRQCKEQQRQIQMSLMLADIPHVLDLIWSWIAPLEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLREEMEAVFRDKILSVGDNILHLYAQFLFSKEHEELVGIYASQLARHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSMDESKGSFEEIIERVLLRSREVKIGKYDNQSDVAEQHRLQSLEKAKVIQWLCFTPPSTITNVKDVSKKLLLQALEHSNVLFREFALISMWRVPAMPIGAHTALGFLAEPLKQLAETIETSEDHNVFEDLREVEEWREYYSCDATYRNWLKIELENAEVPVSELSLEEKERAISAAKETLTASLSLLERRETQWLASTDNIYESAEPVFLELHATAMLCLPSGDCLCPDATVCTTLTSALYASVGDEVVSNRQLMVKVSISSRDNYCIDIVLRCSAIFDDGLGPHDINDGGILSTILAAGFKGELPRFQAGVTMEISRLDAWYSNKDGILEFPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVQPDSHDNLIELVGSPETRFLDLFSQQQLQEFLLMEREYSICKMEHTHE 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00697 1075 Coils Coil 69 89 - -
Tsu08g00697 1075 Gene3D - 1001 1075 - -
Tsu08g00697 1075 Gene3D - 694 892 - -
Tsu08g00697 1075 PANTHER NUP107-RELATED 5 1072 IPR007252 GO:0005643|GO:0017056
Tsu08g00697 1075 PANTHER NUCLEAR PORE COMPLEX PROTEIN 5 1072 - -
Tsu08g00697 1075 Gene3D - 274 423 - -
Tsu08g00697 1075 Pfam Nuclear pore protein 84 / 107 193 864 IPR007252 GO:0005643|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00697 K14301 - gmx:100786552 1851.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00697 08 7459757 7474765 Tsu08g00697 08 7459757 7474765 ECH