Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00682 ATGGCCGGACAATTTTCCAGCTCCGTCGAATTCGGCCTCAATCTCTCAAAACGAATTCATCACATTAAAGGATCAGCTCCGGCGCCGTTACCGGAGATGACGAGGACATCGTCGGAGGAATTTCTACCGACGGCACCGATGTGTTATGCGGTTATACCTGATCCGCAGGTAGTAGATAATCCGGATATTAGAAGCTATCAACCGTATGTGTACGGACTGTGTGATCCTCCGGCGTTGATACCGCTTCAGCTTCATGGAATTGACATGGAAGTTGAGTGTTGTTTAGATACGGCGTTTGTAACGGTTATAGGACGGTGGCGCGTGCACTGTGTTTCGGGAAGTGGTTTGTGTGATTGTCAAGTTGCTATTCCAATCGGAGAACAGGGTTCACTTCTAGGTGTTGAGGTTGATGATTCTGGAAAATCCTATCACACTGAATTGATTTCTCTGAAAGATGAAAAAGATAAGCAGAGAATGGCCAAAGCTAAAGATGGATACTTTTTAAAAAGCCAAATATACATTGTTAAGATTCCACAGTTTAAGGGAGGCTCCATCTTTTCAGTTAAGATGAAATGGTCCcagaaaatattatttcatgatGGTGAATTCGGTCTTACCGTCCCTTTCTGTTTTCCTTCATATGTCAACcctgttggaaaaaaaaattccaagaaagagaagatatttttgaaattgaattctGGTACTGCAAATGAAGTGTTATGCAAAGCTACTAGTCATCCTCTTAAGGGACTAATGAGCCAAGCTGGaaaattaagtttatcataTGAAGCAGAAGTACCAGCTTGGTCAAGTACAGACTTCAGTTTCTCGTACACGGTTTCTTCAAGTGACATATTTGGCGGTGTTCTCTTACAATCCCCTTTCCTGCGTGATTTTGACGAAAGAGAGATATTCTGCCTGTATCTTTACCCTGGAAATTGCCAGGATAGAAAGGTTTTTAAAAGGGATGTGGTGTTTGTAGTAGATATAAGTGCAAGCATGAAGGGAATTCCTCTTGAAAACGCAAAGAATGCGCTACTAGCATCACTCTCTCAATTAAACCTGCAAGATACTTTTAACATTATAGCTTTCAATGGTGAGTCCTATTTATTCTCGCCATCGATGGTATCAGCTACAAACGAAGCAATTTTAAAGGCTTCCACATGGGTTGACACTACTTTTATAGCAAATGGTGGTACTAACATCATGCATCCTTTAACTCAGGCAATGAACTTACTTCGAAAATCAAGTGACGCAGTCCctcttatttttcttgttaCTGATGGGGCTGTTGAGGATGAGAGAGAGATATGTGAATTTGTGAAAAGCTATGTAACAAGTGGGAAATCGGTTTGCACACCGCGCATATGCACGTTTGGCATAGgttTATATTGTAATCGCTACTTCCTGCAAATGCTAGCACAAATTGGGAGGGGTCACTATGATGCCGTTTTTGATTTAGATACAATTGACATCCGAATGCAACGGCTATTTAGTACTGCTTCATCAGTTATAGTTGCTGATATCACCATCAAAAGTTTAGAAGGGCTTGATTCACAGGAGCTGTTCCCAAGTCATATTCCTGACCTATCATTTGGAAGTCCATTGATCATATCAGGCAGATACTATGGAACTTTTCCTGAACTAGTTAAGGTTACTGGTACATTTGCAGATACGACCAGCTTTGTAGTGGACCTTAAAGTGAAAAGAGAAAAGGATATGAAACTCACTAATGTCTTTTCAAAGAGACATATAGACCTAGTCACTGCTCATGCTTGGTTATTAGAAAGTGAAGAGCTGGAAGAGAAGGTTTCTAAAATGAGCATTCAAAATAACATCCCCTCAGAGTATACCTGCTTGGAGATGATTCTTGTCAAGAAAGACGATGGCAAGAAGGCACCGGACAACTTTCTGTTACAAAAGGCATACAGCCAACTTAGCTTCAAGGGATTGGAACATGACATCCCAAAGTTATTTCTTGGAGGATTGAGTCACGGATTTGGTGACACGAAAGCAACTGCTGAGAACATTCCACCagcaacaaaagaagaaaaacatggACTATTAGAGAAGGCAGCTTCTACTTGTTGCAGTAAGGTAGCTGACACAATTTGTTGCATGTGTATGCTAAAGGCTTGCTCTTTTGTGAATGATGGATGCACCATAGTTTGCACTCAACTTTGTGCAGCATTGGCTTGTTTTGAGTTAATTAAATGTTGTATTGAGCTCTGTGACTGTGATTGTTTGTAA 2253 0.391 MAGQFSSSVEFGLNLSKRIHHIKGSAPAPLPEMTRTSSEEFLPTAPMCYAVIPDPQVVDNPDIRSYQPYVYGLCDPPALIPLQLHGIDMEVECCLDTAFVTVIGRWRVHCVSGSGLCDCQVAIPIGEQGSLLGVEVDDSGKSYHTELISLKDEKDKQRMAKAKDGYFLKSQIYIVKIPQFKGGSIFSVKMKWSQKILFHDGEFGLTVPFCFPSYVNPVGKKNSKKEKIFLKLNSGTANEVLCKATSHPLKGLMSQAGKLSLSYEAEVPAWSSTDFSFSYTVSSSDIFGGVLLQSPFLRDFDEREIFCLYLYPGNCQDRKVFKRDVVFVVDISASMKGIPLENAKNALLASLSQLNLQDTFNIIAFNGESYLFSPSMVSATNEAILKASTWVDTTFIANGGTNIMHPLTQAMNLLRKSSDAVPLIFLVTDGAVEDEREICEFVKSYVTSGKSVCTPRICTFGIGLYCNRYFLQMLAQIGRGHYDAVFDLDTIDIRMQRLFSTASSVIVADITIKSLEGLDSQELFPSHIPDLSFGSPLIISGRYYGTFPELVKVTGTFADTTSFVVDLKVKREKDMKLTNVFSKRHIDLVTAHAWLLESEELEEKVSKMSIQNNIPSEYTCLEMILVKKDDGKKAPDNFLLQKAYSQLSFKGLEHDIPKLFLGGLSHGFGDTKATAENIPPATKEEKHGLLEKAASTCCSKVADTICCMCMLKACSFVNDGCTIVCTQLCAALACFELIKCCIELCDCDCL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00682 750 SUPERFAMILY vWA-like 323 485 IPR036465 -
Tsu08g00682 750 PANTHER INTER ALPHA-TRYPSIN INHIBITOR, HEAVY CHAIN-LIKE PROTEIN 1 747 - -
Tsu08g00682 750 CDD vWA_interalpha_trypsin_inhibitor 321 497 - -
Tsu08g00682 750 Gene3D von Willebrand factor, type A domain 322 502 IPR036465 -
Tsu08g00682 750 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 747 - -
Tsu08g00682 750 Pfam von Willebrand factor type A domain 324 482 IPR002035 -
Tsu08g00682 750 ProSiteProfiles VWFA domain profile. 324 502 IPR002035 -
Tsu08g00682 750 SMART VWA_4 322 493 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00682 Tsu-Chr8 7326954 7335519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00682 - - gmx:100807956 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00682 08 7326954 7335519 Tsu08g00682 08 7326954 7335519 ECH