Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00680 ATGGCAACTGCAACAATGGCTACTGCAGCAGGTGCAGCAGCTCTTTTGTACTACACATTGAATAGGAAATTGCAGACTCATGGCACAAttgatgaagatggtgatgaaagTGGTAGTGAAGCACCAACTGACGTGCGGTTTCGTGTTACTCATAGGTTAATTCAAGCGCCTGCGACATGGTTGGAGACAATTTCAACATTGTCTGAAACTCTAAGGTTTACATATTCGGAGACGCTTGGTAAATGGCCAATTGGGGATTTGGCATTTGGTATCAGCTTTCTTCTCAAGAGACAGGGGAACTATCATGTTGACAGTATATTTTGTGGTAAGGACAGTGTACAGCTGAAAGGGTCCGAGATTACTGCTGAACTTAAGCATCTGTTAAACTTGCTGACTCTGTGTTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTCTAGAAGAAACTGGTTACACTGATGAGAATGTTCTTCTCCGGGAAGCGAAAGCTGGCATTTTGAAACCAGCTTTTACAATCATAGTTGATCACAAGATGAGGCGTTTGTTATTGTTGATTCGTGGCACGCATAGTATCAAGGATACTCTAACAGCAGTTACAGGAAATGTGGCACCATTTCATCACACTGTAGTTCATGAGGGGGGTGTTAGTGATTTGGTTTTAGGCTATGCGCATTGTGGAATGGTTGCTGCTGCACGTTGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGATGCACTTAGTAAATACCCAGACTATGAAGTTAAGATTGTAGGACACTCTTTGGGTGGAGGCACAGCAGCAATTCTAACATACGTATTAAGAGAGCAAAAGGAACTGTCTGTGGCTACTTGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCACTAGTTTTATTACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTTTCTGCTGCATCTGTCGATGACTTGCGTACCGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAAtcaaattgagcaaacaagAATACTCAGTACTGTCTATCGTTCTGCCTCAGCACTAGGTTCTCGCCTCCCATCTATTGCAAGTGCTAGAGCAAAAGTTGCCGGCGCTGGGGCTATGTTGCAGCCAGTTTCTAACGGCACTCAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGTCCAAACCTTAACCTGACTTCTTGGTCATGTATTGGACCCCGTCGCCGAGCCACAGGTCATTCCAACTCCAAAGATGATGGATGTTCCCCTTCATCTTCAGCCTCTGACAATGCAGAATGTTCTGATCCACTTATTTTTTCGCCAAGGAAGGGAATAAATGCCAAGAGCATGAACCTTCCTGTATCTTCATCTGTAGATGAGTGGTCAACTGAAATTGAATGTGAGAATGAAAGTATTGCAGATGCTGAGGTCGACGATGATCTCCATCTCAGTGAGAACATGATCGACCATGAAAGATATGAAGATCAGATGAGCGAAGTCGAGTTGTGGCAACAACTGGAGCATGAGTTATATGACAGACCTGAAGGTGAGGAGGCTGACGTGACTAAGGAGataagagaagaagaggaagcaGCCACAACCGAGGTAGTAGGGCAAACCCGTAACAGGTCTGCACCAGAAATTGATGAAGTTCACAGATTTTACCCTCCAGGAAAGATAATGCACATTGTTACACTCCACTCCGATTCTAATGAGATTGAAAGTGATGGCAGCCGAACCTCTTCTACAAGTTCGGACGATAGCGAACAAATTGAGACTAAGATTGGGATTTTCCTAACTTCAAGGTCTCTATATAGTAAACTCAGACTTTCACAGACCATGATAAGTGATCACTTCATGCCAATATATAGAAAGCAGATTGAGAGGCTAATTAAAGAACTCGAGGAAGAATCTATCGAGGATCATAGAACACGAGAAGTAATGTTATAG 1983 0.4256 MATATMATAAGAAALLYYTLNRKLQTHGTIDEDGDESGSEAPTDVRFRVTHRLIQAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYHVDSIFCGKDSVQLKGSEITAELKHLLNLLTLCWHFSKKPFPLFLEETGYTDENVLLREAKAGILKPAFTIIVDHKMRRLLLLIRGTHSIKDTLTAVTGNVAPFHHTVVHEGGVSDLVLGYAHCGMVAAARWIAKLATPCLLDALSKYPDYEVKIVGHSLGGGTAAILTYVLREQKELSVATCVTFAPAACMTWELAESGTSFITSIINGADLVPTFSAASVDDLRTEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIASARAKVAGAGAMLQPVSNGTQVVMKRAKSMAQAAWTRPNLNLTSWSCIGPRRRATGHSNSKDDGCSPSSSASDNAECSDPLIFSPRKGINAKSMNLPVSSSVDEWSTEIECENESIADAEVDDDLHLSENMIDHERYEDQMSEVELWQQLEHELYDRPEGEEADVTKEIREEEEAATTEVVGQTRNRSAPEIDEVHRFYPPGKIMHIVTLHSDSNEIESDGSRTSSTSSDDSEQIETKIGIFLTSRSLYSKLRLSQTMISDHFMPIYRKQIERLIKELEEESIEDHRTREVML 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00680 660 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 648 - -
Tsu08g00680 660 CDD Lipase_3 174 319 - -
Tsu08g00680 660 Gene3D alpha/beta hydrolase 144 356 IPR029058 -
Tsu08g00680 660 MobiDBLite consensus disorder prediction 419 444 - -
Tsu08g00680 660 SUPERFAMILY alpha/beta-Hydrolases 142 320 IPR029058 -
Tsu08g00680 660 Coils Coil 631 651 - -
Tsu08g00680 660 Pfam Lipase (class 3) 183 320 IPR002921 GO:0006629
Tsu08g00680 660 Pfam Lipase 3 N-terminal region 48 127 IPR005592 GO:0016042
Tsu08g00680 660 MobiDBLite consensus disorder prediction 427 444 - -
Tsu08g00680 660 MobiDBLite consensus disorder prediction 581 601 - -
Tsu08g00680 660 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00680 Tsu-Chr8 7303152 7309317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00680 15 653 Acyl Lipid Metabolism Gene Families AT3G14075 63.272 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00680 - - gsj:114390808 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00680 08 7303152 7309317 Tsu08g00680 08 7303152 7309317 ECH