Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00590 ATGTCCTTGGACAATGAAACAGGATTGGATCCACCTGGCATAAGAGTAAGGCCTGTTTCTGGACTTGTAGCTGCTGACTACTTTGCTGCAGGATACTTTGTTTGGGCCGTTCTAATTGCTAACTTGGCACGCATTGGTTATGAAGAAAAAACCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACCGAGGTGCGAGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGTGGAAATAAAGCGGTTATTATTCCACATTCGATGGGGGTTTTGTATTTTCTTCATTTCATGAAATGGGTCGAAGCACCAGCTCCTTTAGGGGGTGGAGGAGGACCAGATTGGTGTTCCAAATATATTAAGGCAGTTGTAAACATTGGTGGACCATTTTTAGGCGTTCCAAAGGCTATAGCAGGGCTTTTCTCAGCCGAAGCCCGAGATATCGCTGTTGCCAGGGCGATTGCACCGGGATTTTTAGATAGCGATATGTTCCGCCTTCAAACGTTGCAACACGTTATGAAGATGACTCGTACTTGGGACTCAACAATGTCAATGATACCAAAAGGAGGGGACACCATATGGGGTGGTCTTGATTGGTCACCTGAAGAGGCTTGCCGCCTTAATATCAAGAAGCAAAGTGGTGACTATATTCAGTTGACAGACGAAGAGACAAATAAAACACATGTTAACTATGGAAGATTGATATCATTTGGAAGAGATGTCGCAGAGGCAGATTCGTCTAAGATTGAGATTGTTGAATTTCGGGATGCAATTAAGGGTCCAAATATTGCAAATACCACATGTCGTGATGTGTGGACCGAATACCATGACATGGGAGTCGGGGGAGTAAGAGCAATTGCAGATCATAAAGTTTACACAGCTGGCTCAATCATAGACCTACTTTACTTTGTTGCTCCGAAAATGATGGAGCGTGGTGGTGCTCATTTCTCTTACGGAGTAGCTGACAATTTAGATGATCCTAAATATGAACACTACAAATATTGGTCAAACCCCTTGGAAACAAAATTACCAAATGCTCCTGATATGGAAATTTTCTCTCTATATGGAGTTGGCCTACCAACCGAAAGAGCTTATATTTACAAGTTATCTCCCTTTGCCGAGTGTTACATTCCTTTTGAAATTGATCCTACGGCTGATGGTGGTACCGAAGTTAGTTGTCTGAATGATGGTGTCTACACTGTTGATGGTGATGAGACCGTTCCAGTTCTAAGTTCAGGTTTCATGTGTGCTAAAGGTTGGCGTGGAAAAACACGATTCAACCCTTCAGGAATCAAAACTTATGTTCGAGAATATGATCATTCTCCTCCGGCCAACCTGCTAGAAGGAAGAGGAACACAAAGCGGTGCTCATGTTGATATAATGGGAAACTTTGCGTTGATTGAAGATGTTATGAGGGTCGCAGCAGGAGCCAAAGGAGAAGAGTTGGGAGGCGATAGGGTGTATTCTGATATCTTTAAATGGTCCGACAGAATCAAGTTACCTTTGTGA 1539 0.4269 MSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPLGGGGGPDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARAIAPGFLDSDMFRLQTLQHVMKMTRTWDSTMSMIPKGGDTIWGGLDWSPEEACRLNIKKQSGDYIQLTDEETNKTHVNYGRLISFGRDVAEADSSKIEIVEFRDAIKGPNIANTTCRDVWTEYHDMGVGGVRAIADHKVYTAGSIIDLLYFVAPKMMERGGAHFSYGVADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGLPTERAYIYKLSPFAECYIPFEIDPTADGGTEVSCLNDGVYTVDGDETVPVLSSGFMCAKGWRGKTRFNPSGIKTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVMRVAAGAKGEELGGDRVYSDIFKWSDRIKLPL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00590 512 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 1 512 - -
Tsu08g00590 512 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 1 512 - -
Tsu08g00590 512 Pfam Lecithin:cholesterol acyltransferase 3 472 IPR003386 GO:0006629|GO:0008374
Tsu08g00590 512 Gene3D alpha/beta hydrolase 6 186 IPR029058 -
Tsu08g00590 512 SUPERFAMILY alpha/beta-Hydrolases 30 457 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00590 Tsu-Chr8 6388915 6394005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00590 1 512 Acyl Lipid Metabolism Gene Families AT5G13640 76.893 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00590 K00679 - gmx:100812643 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00590 08 6388915 6394005 Tsu08g00590 08 6388915 6394005 ECH