Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00580 ATGACTAATGAACTGAATAATCACACTGGTTCAATAGAAATTACAACAAACAAGGAACCACAGAAAGGTTGGAGAAATGTATTAGAACGAGTAGGAAAATGGATGGCACTCGAAGACAAGGATAAATGGTTGGATCAAATGAGAGGGAATTTGAGTTTAGTAGCAACAGTCATTGCAACAATGACATTTCAAATGGCTTTAAGTCCACCCGGTGGCGTTAGGTCGATTAAAGAGGACACAAATCCACCTGGTGGTGTTAGGTCGATTAAGGAGGACACAAATCCACCTGGTTTCGACAATACTGACCCACTTGGTTGTACTTTCATCAGCAAACCAAGTTTGTGGCTATGTCCGGGTGAAGCTGTCTTAGCCGCTAAATATCCTCGTAAATATTTTCGGTTCTTAGTTTCAAACACAATTTGTTTCATTGCATCACTAATTATTAGTCTCTTTCTTGTGAGTGGAGTTCCTTTGAATAACAGGTTTCCTATATGGTTTTTAATAATAGGCATGTGTGCCACACTCACAAGCCTTACCATTTCTTATACAACAGCTTTTCAATTGACCACACCAGATCCTATTTTTGATAAAGCTAACAAGTTTCTTATAAAGTTGCTTAATACTTGGATTGGATTGTTATCGTGTATTGCTTTGTTGCATACACTAAGGTTCGTTATTTGGGGAGTGAAATTTTGCCAAAAAAGAAGTAAGAAGAAGGCAATGGCTCAAAATATTACAAAGGAGATTCCAGCTTGCTAG 759 0.3794 MTNELNNHTGSIEITTNKEPQKGWRNVLERVGKWMALEDKDKWLDQMRGNLSLVATVIATMTFQMALSPPGGVRSIKEDTNPPGGVRSIKEDTNPPGFDNTDPLGCTFISKPSLWLCPGEAVLAAKYPRKYFRFLVSNTICFIASLIISLFLVSGVPLNNRFPIWFLIIGMCATLTSLTISYTTAFQLTTPDPIFDKANKFLIKLLNTWIGLLSCIALLHTLRFVIWGVKFCQKRSKKKAMAQNITKEIPAC 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00580 252 PANTHER CASKIN 121 229 - -
Tsu08g00580 252 PANTHER ANKYRIN REPEAT-CONTAINING DOMAIN, PGG DOMAIN PROTEIN-RELATED 121 229 - -
Tsu08g00580 252 MobiDBLite consensus disorder prediction 72 94 - -
Tsu08g00580 252 Pfam Domain of unknown function 42 185 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00580 Tsu-Chr8 6317650 6318408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00580 45 194 Miscellaneous Gene Families AT1G14480 31.333 2.71e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00580 - - mtr:MTR_8g018980 250.751