Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00577 ATGGAGACAATGAACATTGAAACGGAAACTCATGGTGGTTCAACAGTTGAAACTACAACAAATGAGGAACAACATAAAGGTTGGAGAATGGTTTTAGAACGAGTAGGAAGTTGGTTATCATACGAAGACAAGAATTTATGGTTGGAACAAATGAGAGGGAACTTAGGTTTAATCGCAACGGTCATTGCAACAATGACATTTCAAATGGCTTTAAATCCACCTGGTGGTGTTAGGTCAATTAGTGATGGAGCAAATCAACCCGGTTCCAATACTGCTAACGCAAATCCACCCAACGCTTACGCATATCCACCCGATGATTATGCATATCCGCCCCGTGATAACCAAGGTAGCTCAAACTTGGATGGTCTATCTTGTGCTCTCAGCGGCTACGAAATATTGCAACTATGTCCGGGTGAAGCTGTCTTAGCCGTTATATATGAAGACTCGTATTTTCGGTTCCTTGTTTCAAACACGGTTTGTTTTATTGCATCACTATGCATTTTGCTCTTGCTTGTGAGTGGAATTCCTTTGCATCACAGGTTACATATGTGGATGTTATCAATAGGGATGTGGGTAACTCTCACAGCCCTTGCTGTATCTTATATAACAGCCGTGCAAATGACCACACCAGATCCTATTTTTGAAAAGTCTAGCAAATTTCTTTTATGGTTGGTTATTGCTTGGTTGATATTGTTAGGCATTATTGCGTTGTTCCATACACTAAGGATAGTTATTTGGGTAGTCAAATTTTTCCTCAAAAGAAGTAAGAACAAATCCACTCGCAGTTATTCCAACATCACCCGCCAACGTGTGAATTGA 819 0.4029 METMNIETETHGGSTVETTTNEEQHKGWRMVLERVGSWLSYEDKNLWLEQMRGNLGLIATVIATMTFQMALNPPGGVRSISDGANQPGSNTANANPPNAYAYPPDDYAYPPRDNQGSSNLDGLSCALSGYEILQLCPGEAVLAVIYEDSYFRFLVSNTVCFIASLCILLLLVSGIPLHHRLHMWMLSIGMWVTLTALAVSYITAVQMTTPDPIFEKSSKFLLWLVIAWLILLGIIALFHTLRIVIWVVKFFLKRSKNKSTRSYSNITRQRVN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00577 272 MobiDBLite consensus disorder prediction 1 24 - -
Tsu08g00577 272 MobiDBLite consensus disorder prediction 78 99 - -
Tsu08g00577 272 PANTHER CASKIN 141 249 - -
Tsu08g00577 272 MobiDBLite consensus disorder prediction 82 97 - -
Tsu08g00577 272 Pfam Domain of unknown function 47 94 IPR026961 -
Tsu08g00577 272 Pfam Domain of unknown function 137 205 IPR026961 -
Tsu08g00577 272 MobiDBLite consensus disorder prediction 1 21 - -
Tsu08g00577 272 PANTHER ANKYRIN REPEAT-CONTAINING DOMAIN, PGG DOMAIN PROTEIN-RELATED 141 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00577 Tsu-Chr8 6289158 6292379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00577 49 232 Miscellaneous Gene Families AT1G14480 28.649 1.78e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00577 - - mtr:MTR_8g018980 249.595