Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00561 ATGGAACAAGAGGAAGAAACATCAACAATGTCACCATTTTGGCTCCCCAAAACCACCACAAACCACCACCGTCTCCGCCGCACATATTCTCTCATTCAAACAACAACCTCATTCTTCATACTTCTCATCATAACAGCACTTGTCTTAACATTCATTGTGGTCCCCACTTTAAAATCTTTCACTTCAAATATCTTCAAACCACAAACAATTAAACACTCTTGGGATTACTTAAACCTTATACTCGTTCTTTTCGCTGTAGTTTGTGGTTTTCTTACTAAAAACGACACCAACGAAACGCAGCGTTTTGATAGTTACAATTACAATAATAATCATCGAAGAAGCTTCTCGAATCCTGAAACTCCTCCATCATGGTATGATGATTCTAATCGGTCGTTTAATCGGTTGAGAACCGTTGGATCTGTTCCGGATCTCCGGCAACGGACGGTGTACGTTGAAGATGATGATCGGTATCGATTTTATGATGATACGAGTGTTCATTTTCGTTATCGGAATCTGAGATTTGAAGATGAACTTCATCGGGAAACGGTTACTTCCGGTGAAGTTTTCCGGCAATCTTTGCCGGATTCTCGAATTGAAGATGTTAGGAGAAATGTTGAACGAATATATGAAGTTGAAACGGTTGAGAAATCGGAAATTAATGATGATTCTGTTGCTGAGAATTCATATTTGCCGTCGCCGCCGTCGCCGCCACCGCAACCGGCGGTGAGGAAGAAGAAAAGTAGGAGTGTGTCTAAAGAAAACGCGGCAACGGTTAATTCTGTGGAGTTTTCGTCACCGGTACCGGAGCTAAATCCGCATCCGCTACCGGCGGTGATGCCGGTGGCGAGAAAGGGAAAAAGTAGGAGTGCGTCTAAAGAAGATGTGGAAACTGTTGCTTCTGCGGAATTTTCCTCGCCGGTGTTGGAATCGGAGGGAAATCTGCAACCGCCCGTGATGAGGACTAAAGGTGTTCGAAGAAATGTCAAGCGGACATATCAATCGGAAACGATTGAGAATTCGGAGGATAGTGATTTTGTGGCTGAGAATTCTCAACTGCCGCCACCAGTGACAGTGGTGGCTTCGCCGTTATGGGCGGAGAGGAAGATCGGTATTCCGGTTaagaagaaaagagtgaatGCAACTAAAGAATTTTTAGCCTCATTGagagggaagaagaagaagaaacaaagacaaaaaagtGTTGAAAATTTTGAGAGCTCTCAAAATTCTCAACCTACACCGGTTGTTTCGCAACCGCCACCACCACCGCCTCCTCCACCACCGCCGTCAGTTTTTCAAAGCCTGTTCTCTTCCAACAAAAGCAAACACAAAAAACACTACCATGTTCCTGTGGCTACCTATAAACCTCAATTACCAAACAAGAGAGAACAATCTAATTATAGATTGAAAGAAAATGTGATTATTGGTAATGAGTCACCCTTGATTCCTATCCCACCCCCGCCACCGCCTCCTCCGTTTAAGTTACCGGCGTGGAAGTTTAGGGTTCAAGGTGATTATGTTAGGGTTGATAGCATTGGAAGTTCAAGGAGTGATTCACCGGATTCAGATGAAGTTCTTGAGTCACCAATTAGTCAATGCAGTAATAGTCCCTATGCAGATGATGGTGAAGAGCGCCGTGTTACTGAAATTGGAAATGCAAGTGAAGCGTCGTTGTTTTGTCCTAGCCCGGATGTTGATACTAAAGCTCAGAACTTTATTCAGAATTTTAGAGCTGGGTTGAGGATAGCTAAGATGAATTCCTTGAGGGAGAAGCAGGGAATTGGGATGTCCAATCTTGGAAAACCCTTAAGCTGA 1815 0.427 MEQEEETSTMSPFWLPKTTTNHHRLRRTYSLIQTTTSFFILLIITALVLTFIVVPTLKSFTSNIFKPQTIKHSWDYLNLILVLFAVVCGFLTKNDTNETQRFDSYNYNNNHRRSFSNPETPPSWYDDSNRSFNRLRTVGSVPDLRQRTVYVEDDDRYRFYDDTSVHFRYRNLRFEDELHRETVTSGEVFRQSLPDSRIEDVRRNVERIYEVETVEKSEINDDSVAENSYLPSPPSPPPQPAVRKKKSRSVSKENAATVNSVEFSSPVPELNPHPLPAVMPVARKGKSRSASKEDVETVASAEFSSPVLESEGNLQPPVMRTKGVRRNVKRTYQSETIENSEDSDFVAENSQLPPPVTVVASPLWAERKIGIPVKKKRVNATKEFLASLRGKKKKKQRQKSVENFESSQNSQPTPVVSQPPPPPPPPPPPSVFQSLFSSNKSKHKKHYHVPVATYKPQLPNKREQSNYRLKENVIIGNESPLIPIPPPPPPPPFKLPAWKFRVQGDYVRVDSIGSSRSDSPDSDEVLESPISQCSNSPYADDGEERRVTEIGNASEASLFCPSPDVDTKAQNFIQNFRAGLRIAKMNSLREKQGIGMSNLGKPLS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00561 604 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 127 602 - -
Tsu08g00561 604 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 125 - -
Tsu08g00561 604 MobiDBLite consensus disorder prediction 384 465 - -
Tsu08g00561 604 MobiDBLite consensus disorder prediction 252 266 - -
Tsu08g00561 604 MobiDBLite consensus disorder prediction 219 327 - -
Tsu08g00561 604 MobiDBLite consensus disorder prediction 511 544 - -
Tsu08g00561 604 MobiDBLite consensus disorder prediction 511 538 - -
Tsu08g00561 604 MobiDBLite consensus disorder prediction 414 432 - -
Tsu08g00561 604 PANTHER COTTON FIBER (DUF761) 127 602 - -
Tsu08g00561 604 PANTHER COTTON FIBER (DUF761) 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00561 Tsu-Chr8 6106525 6108854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00561 - - cam:101490988 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00561 08 6106525 6108854 Tsu08g00561 08 6106525 6108854 ECH
Tsu02g05339 02 61995424 61996947 Tsu08g00561 08 6106525 6108854 PCT