Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00511 atgaagggGACATTCTTCTGTTTTATGCTAACTCTTCACATAGTGAGTTTGGTTTGTGTAGCAAGAAGGCCATTTCTTTCAAATCAAGGCATTTCTCATTCTGCTCAAGAAAAGCCTACAAAGTCTTCACCAACTTATACCATTGAATCAAAAAAGgtAAAGGGTATAATGGGAATAGAAGGAATGTCAAAGacaagagaagaagaaaatgatagAGGAGTGAGTAAAATAGGGTCAAGTCCACCAAGTTGTGAGAAAAAATGCTATGGTTGTTTTCCATGTGAAGCTACTCAAGTGCCAACTACAACAAACCATTTGGGGATTATAGAAACGAACGTCATTTTCGAACTCCTCATAACCAACGTGATTGCTTGA 375 0.344 MKGTFFCFMLTLHIVSLVCVARRPFLSNQGISHSAQEKPTKSSPTYTIESKKVKGIMGIEGMSKTREEENDRGVSKIGSSPPSCEKKCYGCFPCEATQVPTTTNHLGIIETNVIFELLITNVIA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00511 124 Pfam Epidermal patterning factor proteins 76 102 - -
Tsu08g00511 124 MobiDBLite consensus disorder prediction 59 83 - -
Tsu08g00511 124 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3 1 112 - -
Tsu08g00511 124 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 1 112 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00511 Tsu-Chr8 5327445 5332106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00511 - - lja:Lj3g3v2666510.1 142.51