Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00509 ATGCAAATGATAACAATAAGACAAATGGATTATGAATCTAAAGAAGTTGATGCTACTACCTTAAGAACAATGAGTTTCAAGAGTGAAAGAAATATAGATGAATTATATAATCAACAAGGGTTAGATGAAGAAGCTATAGTTGAAGAATCAACATGTTCAAAGAGAAGGAAAATTGGGAATTTGAAGCTTCAAACTACATTCTCATTCAAATATTTAGTTACAGATAACTCTGATTCAAAACAAggttttgttgatgatgttttcaATAAACAAAGTCCTTCAATTTTGTTAGATAAACCACAAATTTGGTTTTCACCAAAATCCATTGGAGAGCTTGATGTTGCAGCAATAAAGCTTCAAAAAGTTTACAAAAGTTATAGAACTAGAAGAAATTTGGCTGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAGGCTTTAGATTTTGCTTCTCTTAATAGATGTTCAATATCACATTTTGATTCAGTTAAATCAGAAACAGCTCTTTCAAAATGGGCTAGAGCTAGGACTATGGCTGCTAAGGTGGGAAAAGGATTGTGTAAAGATGATAAAGCACAAAAATTAGCTCTTAGACATTGGCTTGAAGCTATTGATCCTCGCCATCGATATGGACATAATTTGCACTTATACTACAATGTTTGGTTTCATAGCCAAAGTTCACAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGAAAAGAAGTAAATCTTGATAAGTGTCAAAGAAATGAATTACAGAAGCAATGTATAAAGTACCTTGGACCTaaagaaagagaagTATATGAAGTGGTTATAGAAGAAGGAAGGTTTGTTTATAGAAAAAGCAAGAACCATGTACACACTTTTGAAGGATCTAAGTGGATTTTTGTTCTTAGCTCATCAAGAATTTTGTATGTTGGTGAGAAGAAGAAAGGGCAATTTCAACACTCAAGTTTTCTAGCTGGGGGTGCTACTATTGCATCTGGAAGATTGGTTGTCCAAAATGGTGTTCTTAATAAGAATTTCATGGAATTTATTGGCTTCTTGATGGAACACAATGTGGACTTAACAAATGTAAAGAAGTATCCAATTGATGATGATGTCCCACCTTCAGAACATGTTGACAATGAGCTTCAATTTGAGTCCACAAATACTACTAATGCAAATTCAAGTGACTCTACCAAAAGATGCAACCAAAATAATGTGACAACTTCACAACATAAAGAGTGCAAATCATTGTCAAGCAAATGGACCACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGGGAGTACCCTACAAAACTTCAAGCAAAGGCACTTGAACAACTCAATTTATCACCTAGAGTCAATATTGGAAAAGTTGCTAATAGGACTCCCATTCCCTCACCAAGACCTAGTCCAAAAATTCACTTGTCTCCTAGACTTGTGCATATGGGAATTCCAAGTCCAGGAGTACATATTACTCCCGCTAATTAG 1476 0.3435 MQMITIRQMDYESKEVDATTLRTMSFKSERNIDELYNQQGLDEEAIVEESTCSKRRKIGNLKLQTTFSFKYLVTDNSDSKQGFVDDVFNKQSPSILLDKPQIWFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFASLNRCSISHFDSVKSETALSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYNVWFHSQSSQPFFYWLDVGDGKEVNLDKCQRNELQKQCIKYLGPKEREVYEVVIEEGRFVYRKSKNHVHTFEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVVQNGVLNKNFMEFIGFLMEHNVDLTNVKKYPIDDDVPPSEHVDNELQFESTNTTNANSSDSTKRCNQNNVTTSQHKECKSLSSKWTTGAGPRIGCVREYPTKLQAKALEQLNLSPRVNIGKVANRTPIPSPRPSPKIHLSPRLVHMGIPSPGVHITPAN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00509 491 MobiDBLite consensus disorder prediction 382 405 - -
Tsu08g00509 491 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 3 490 IPR044159 -
Tsu08g00509 491 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 3 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00509 Tsu-Chr8 5291145 5312074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00509 - - ccaj:109809343 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00509 08 5291145 5312074 Tsu02g05353 02 62117412 62120032 PCT