Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00502 ATGAATATATTCTCTACTATTTGGTTATTGCCTCTCTTCACTTTCATTTATTTCGATGGTATTCTTCCTATTAAAGCTACTCACCATGATTATAGAAACCTTCAGAGTTTATCTTCTGATGATTCCACATATCAACTTTATCGAACTGCTTATCATTTCCAACCTCCCAAGAATTGGATGAATGATCCTGCTGGACCAGTAAGGTACAAAGGATACTATCATCTATTCTATCAATATAATCCTAAAGGTGCTGTTTTTGGAAATATTGTTTGGGCACATTCTATTTCAACTGATCTTGTTAACTGGACCCCACTTGATCCAGCCATCATTCGATCTCAACCGTACGATATAAATGGTTGTTATACAGGATCAACCACACTATTACATGGTAACAAACCAGCTATTTTGTACACTGGAAATACTCAATTTAATCAACAAGTACAAAATTTAGCATAccctaaaaatttaaatgacccTTTTCTTAGGGAATGGATTAAGTCACCAAAAAATCCAGTAATGGAAGCAActagtgaaaataaaattaatgcaaGTGAATTTAGAGATCCTACTACTGGTTGGTTAGGAAAAGATGGACTTTGGAGAATAATTATTGGTAGCAATAATAATACTAGAGGAGTTGCAATTTTATATAAGAGTAAAGATTTTCTTAATTGGATTAAATCAAAAGACCCTTTGCATTCAGCTAAGGGTACTGGAACATGGGAGTGTCCTGATTTTTTTCCAGTTTTGAAAATTGGTAAATTTGGTGTTGACACATCATTAAATAATGATGCTGTTAGACATGTTTTAAAGGTTAGTTTAGATGATAACAAACatgattattatttaattggGAGTTATGATGAAGATAAAGACAAATTTACCCCTGATCAAGGATTTGAGGAGGTTGGTATTGAAAATGTTTTGAGATATGATTATGGAAAATATTATGCTTCAAAAACCTTTTTTGATGATGGGAAGAATAGAAGGATTTTGCATGGTTGGGTCAATGAATCCTCAACTGTTGCTGATGATATCAAGAAAGGATGGTCAGGAATCCATACAATTCCAAGGACTATTTGGTTGCACAAGTCAGGAAAACAATTGATACAATGGCCAGTTGAGGAAGTTGAGAAGCTACGAGTAAATCATGTTACCTTGCCCACCAAAGTTCTCAAGGGAGGTGAATTGCAGCAAATTAATGGTGTCACAGCAGCACAGGCTGATGTGGAAATTTCATTTGAAGTGAATAACATTGAAGAGGTTGAAGTTTTGGACAGGTGGACAGACCCTCAAATTCTATGTAGCCAAAGTTCATCAAGAAAAAATGGATTAGGACCTTTTGGTCTACTTGTTTTTGCTTCAAAGGGTTTGCAAGAGTTCACATCAGTATTTTTCAGAATATTCAAATACAACCAAATATTTATGGTGCTCTTTTGTAGTGACCAAAGCAGATCTTCTTTGAATAAAGATAATGATTTGACCACTTATGGGACTTTTATTGATGTGGATATTCTTCATGAGAAGCTGTCATTGAGAACTTTGATTGATCACTCTGTAGTAGAGAGTTTTGGAGGAGAAGGGAGAGCATCCATCACAGCTAGAGTTTATCCGACATTGGCCATCAATGATGAAGCATTACTTTATGCTTTCAATAATGGAACTACTGATGTAAAGATCACAAGATTGAATGCTTGGAGCATGAAGAAAGCACAAATAAATGGAAACTTATAA 1734 0.3379 MNIFSTIWLLPLFTFIYFDGILPIKATHHDYRNLQSLSSDDSTYQLYRTAYHFQPPKNWMNDPAGPVRYKGYYHLFYQYNPKGAVFGNIVWAHSISTDLVNWTPLDPAIIRSQPYDINGCYTGSTTLLHGNKPAILYTGNTQFNQQVQNLAYPKNLNDPFLREWIKSPKNPVMEATSENKINASEFRDPTTGWLGKDGLWRIIIGSNNNTRGVAILYKSKDFLNWIKSKDPLHSAKGTGTWECPDFFPVLKIGKFGVDTSLNNDAVRHVLKVSLDDNKHDYYLIGSYDEDKDKFTPDQGFEEVGIENVLRYDYGKYYASKTFFDDGKNRRILHGWVNESSTVADDIKKGWSGIHTIPRTIWLHKSGKQLIQWPVEEVEKLRVNHVTLPTKVLKGGELQQINGVTAAQADVEISFEVNNIEEVEVLDRWTDPQILCSQSSSRKNGLGPFGLLVFASKGLQEFTSVFFRIFKYNQIFMVLFCSDQSRSSLNKDNDLTTYGTFIDVDILHEKLSLRTLIDHSVVESFGGEGRASITARVYPTLAINDEALLYAFNNGTTDVKITRLNAWSMKKAQINGNL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00502 577 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 373 IPR013148 -
Tsu08g00502 577 SUPERFAMILY Concanavalin A-like lectins/glucanases 373 570 IPR013320 -
Tsu08g00502 577 Pfam Glycosyl hydrolases family 32 C terminal 376 567 IPR013189 -
Tsu08g00502 577 CDD GH32_Fruct1-like 58 362 - -
Tsu08g00502 577 SUPERFAMILY Arabinanase/levansucrase/invertase 45 374 IPR023296 -
Tsu08g00502 577 PANTHER CELL-WALL INVERTASE 4 574 - -
Tsu08g00502 577 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 4 574 - -
Tsu08g00502 577 Gene3D Glycosyl hydrolase domain; family 43 56 383 IPR023296 -
Tsu08g00502 577 SMART glyco_32 52 528 IPR001362 GO:0004553|GO:0005975
Tsu08g00502 577 Gene3D - 384 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00502 Tsu-Chr8 5180690 5188171 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00502 69 574 Glycoside Hydrolase AT3G13790 63.689 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00502 K01193 - gmx:547681 885.945