Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00476 ATGATGAAGGAGAAGATGGAATGCACCGCCATCTCCGTCCGTTCAACAACCGCCTTCTTCACAACTCTCCTCATCCTCATCTCCTCCGTCCATTCCTTCTACCTTCCCGGCGTCGCTCCTCGCGATTTCCAAACCGGTGATGCTCTCTATGTCAAGGTGAACAAATTGTCGTCTACGAAGACTCAGCTTCCGTATGACTACTACTACTTGAAGTATTGCAAGCCTACCAAGATTGTGAACAGTGCAGAAAATTTGGGGGAGGTTCTGCGAGGTGATCGCATTGAAAACTCAATATATACGTTTCATATGAGGAAGGAACAGTCCTGTACTGTTGCTTGCCATGCAATTTTGGATCCTGAATCTGCAaagaattttaaagaaaaaattgatgatgAATATCGAGTGAACATGGTTTTGGATAACCTTCCAGTTGCTGTTCTTAGACAAAGGAGGGACGGAATTCAATCTACAACATATGAACACGGTTTTCGTGTTGGGTTCAAAGGAAACTATCAAGGGAGCAAGGAGgagaaatattttatcaataacCACTTGAGTTTTAGAGTCATGTATCACAAGGATCCTGAAACTGGTTCTGCTCGCATTGTTGGATTTGAGGTCACACCAAACAGTATTAATCATGAATACAAGGAATGGAATGACAAGAATCCACAGGTAACAACATGCAACAAAGATACCAAAAATTTGATGCAAGGTAGTACTGTCCCACAAGAAGTTGACACGAACAAGGATATAGTATTCACATATGATGTTTCCTTTAAGGAAAGTGAAATCAAATGGGCATCACGGTGGGACACATATCTTCTAATGAATGATGATCAGATCCACTGGTTCTCCATCATTAACTCTCTGATGATTGTTCTTTTCCTTTCTGGAATGGTGGCAATGATCATGATGAGAACTCTTTACAGAGATATTGCCAATTATAACCAGCTAGAAACCCAAGATGAGGCCCAAGAAGAAACAGGGTGGAAACTTGTTCATGGAGATGTTTTCAGGCCGCCAATCAATTCAAATTTGCTTTGTGTTTATGTTGGTACCGGTGTTCAGATCTTTGGAATGACACTTGTGACAATGATATTTGCCTTGCTAGGGTTCTTGTCTCCATCTAATCGGGGAGGTCTCATGACTGCAATGGTTCTACTGTGGGTTTTTATGGGTTTATTTGCTGGCTACTCCTCGGCACGCTTGTACAAGATGTTCAAGGGCACAGAGTGGAAGAGGAATACCTTAAAAACTGCGTTTATGTTTCCAGGCATTCTTTTTGCTATCTTCTTCGTGCTAAATGCTTTGATCTGGGGGGAGCAGTCCTCTGGGGCAGTCCCCTTTGGAACAATGATTGCTCTAGTGTGCTTATGGTTTGGTATATCGGTACCCTTGGTCTTTGTTGGAAGTTACCTGGGTTTTAAAAAGCCACAAATTGAAGACCCTGTCAAGACTAATAAAATTCCTAGGCAGGTACCCGAGCAGGCATGGTATATGACACCTGTCTTCTCAATTCTGATTGGTGGCATTCTTCCCTTTGGTGCAGTGTTTATCGAGCTCTTCTTTATCCTTACATCAATATGGCTGAACCAGTTCTACTACATCTTTGGCTTCCTTTTCATAGTGTTTGTCATTCTATTGATCACCTGTGCAGAGATTACGGTTGTGCTTTGCTACTTCCAGTTGTGCAGCGAAGACTACAATTGGTGGTGGAGATCTTACCTCACTGCCGGGTCATCAGCTGTTTACCTTTTCCTCTACtccattttctacttctttaccAAGTTGGAGATTACAAAGCTGGTCTCAGGCATCCTTTACTTTGGGTATATGATAATAATTTCCTATGCCTTCTTTGTTGTGACTGGAACCATTGGCTTCTATGCTTGCTTCTGGTTTGTCCGCAAGATCTACTCTTCTGTGAAGATTGATTGA 1941 0.4127 MMKEKMECTAISVRSTTAFFTTLLILISSVHSFYLPGVAPRDFQTGDALYVKVNKLSSTKTQLPYDYYYLKYCKPTKIVNSAENLGEVLRGDRIENSIYTFHMRKEQSCTVACHAILDPESAKNFKEKIDDEYRVNMVLDNLPVAVLRQRRDGIQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKNPQVTTCNKDTKNLMQGSTVPQEVDTNKDIVFTYDVSFKESEIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDEAQEETGWKLVHGDVFRPPINSNLLCVYVGTGVQIFGMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFAIFFVLNALIWGEQSSGAVPFGTMIALVCLWFGISVPLVFVGSYLGFKKPQIEDPVKTNKIPRQVPEQAWYMTPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITVVLCYFQLCSEDYNWWWRSYLTAGSSAVYLFLYSIFYFFTKLEITKLVSGILYFGYMIIISYAFFVVTGTIGFYACFWFVRKIYSSVKID 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00476 646 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 20 646 IPR004240 GO:0016021
Tsu08g00476 646 Pfam Endomembrane protein 70 64 602 IPR004240 GO:0016021
Tsu08g00476 646 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 20 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00476 Tsu-Chr8 4760519 4765176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00476 31 646 Miscellaneous Gene Families AT3G13772 88.799 0.0 1158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00476 K17086 - gmx:100781403 1216.83