Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00452 atgtctaacattgttattgttttcGATTTTGACAAAACCATCATTGATTGTGATAGTGATAACTGGTTGATTGATGAATTGGGTTTCACTGATTTGTTCAATCAACTCCTTCCCACAATGCCATGGAACTCTGTCAtgGACAAAATGATGATGGAGTTTCATGCAAATGGTGTAACTATTGAAGAGATTGAAAAGGTTCTTCATAGGATTCCAATTCATCATAGAATAGTTCCTGCAATTAAAGCAGCTTATGCTTTAGGGTGTGATTTGAGGGTTGTTAGTGATGCTAATATGTTTTATATTGAAACTATTTTGAAGCATTTGGGAATAAGTGAATATTTTTCAGAGATTAATACTAATCCAGGTTATGTTAATGAAGAAGGAAGGGTTAGAATTTCACCTTATCATGACTTCAACAAATGTTCACATGGTTGCACTCTTTGCCCTCCAAATATGTGCAAGGGTTTAATCATTGATAGAATCCAAAATACAATTTCTGAAGTGGATAAGAAGAGGTTCATCTACCTTGGTGATGGTGCTGGTGATTATTGTCCTAGTTTGAGGCTTAGAGAAAGAGACTTTGTGATGCCAAGAAAGAATTTTCCAGTGTGGGATTTGATATGCAAAGATCCTTTACTTATTAAGGCTGAAATTAATGGTTGGAGTGATGGAGAAGAATTGGAACAAGTTTTGATGCACTTGATCAATAAAATTATGATGGAAGAACATGTTCAATTCATATCAAGTGATTGCAAGTTGCAAACTCTTTCTATTCCAGTGCTTGAATCATTGCCTAAAGCTCTCTCAGTTAGGCCATGA 819 0.3419 MSNIVIVFDFDKTIIDCDSDNWLIDELGFTDLFNQLLPTMPWNSVMDKMMMEFHANGVTIEEIEKVLHRIPIHHRIVPAIKAAYALGCDLRVVSDANMFYIETILKHLGISEYFSEINTNPGYVNEEGRVRISPYHDFNKCSHGCTLCPPNMCKGLIIDRIQNTISEVDKKRFIYLGDGAGDYCPSLRLRERDFVMPRKNFPVWDLICKDPLLIKAEINGWSDGEELEQVLMHLINKIMMEEHVQFISSDCKLQTLSIPVLESLPKALSVRP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00452 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 199 IPR006384 GO:0016791
Tsu08g00452 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Tsu08g00452 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Tsu08g00452 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Tsu08g00452 272 SUPERFAMILY HAD-like 4 187 IPR036412 -
Tsu08g00452 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Tsu08g00452 272 Gene3D - 1 188 IPR023214 -
Tsu08g00452 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00452 Tsu-Chr8 4439379 4440845 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00452 K13248 - gmx:100785878 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00452 08 4439379 4440845 Tsu02g05389 02 62444367 62446877 PCT