Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00448 ATGTCtaatattgttgttgttttcgaTTTTGACAAAACTATCATTGATTGTGATAGTGATAATTGGGTTATTGATGAATTAGGGTTCACTGATTTGTTTAATCAGCTTCTTCCAACCATGCCTTGGAACTCCCTCATGGACAAGCTGATGATGGAGCTTCATTCAAATGGTGTAACCATTGAAGAGATTGAAAAGGTTCTTCATAGGATTCCAATTCATCATAGAATAATACCTGCAATCAAATCAGCACATGCTTTAGGGTGTGATTTGAGGATTGTTAGTGATGCCAATGTGTTTTTCATTGAAACTATTTTGAAGCATTTGGGAATAAGTGAATGCTTTTCAGAGATTAACACTAATCCTGGTTATGTTAATGAAGAAGGAAGATTAAGAATTTTGCCTTATCATGATTTCAATAAGGTTTCACATGGTTGCCCTCTCTGTCCTCCAAATATGTGCAAGGGTTTGATCATAGATAGAATCCAAAGTTCTATTTCTGAAGTGGATAATAATAAGAGGTTTATCTATCTTGGTGATGGTATTGGAGATTATTGTCCTAGTTTGAGGCTTAAAGAGAGAGATTTCATGATGCCAAGAAAGAATTTTCCAGCTTGGGATTTAATATGCAAAGACCCTTCACTTCTTAAGGCTGAAATTCATGGTTGGATTGATGGAGAAGAGCTGGAACAAATTTTGATGAAGTTGATTAACAAAATTATGATAGAGGAAAATGCTCAATTCATTTCTTCTGATTGCAAGTTGCAATCTCTATCAATTACTGTGCATGAAACCTTGCCAAAAGCTCTCTCAGTTAGGCCATAG 822 0.3455 MSNIVVVFDFDKTIIDCDSDNWVIDELGFTDLFNQLLPTMPWNSLMDKLMMELHSNGVTIEEIEKVLHRIPIHHRIIPAIKSAHALGCDLRIVSDANVFFIETILKHLGISECFSEINTNPGYVNEEGRLRILPYHDFNKVSHGCPLCPPNMCKGLIIDRIQSSISEVDNNKRFIYLGDGIGDYCPSLRLKERDFMMPRKNFPAWDLICKDPSLLKAEIHGWIDGEELEQILMKLINKIMIEENAQFISSDCKLQSLSITVHETLPKALSVRP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00448 273 PANTHER INORGANIC PYROPHOSPHATASE 1 271 - -
Tsu08g00448 273 SUPERFAMILY HAD-like 4 191 IPR036412 -
Tsu08g00448 273 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 200 IPR006384 GO:0016791
Tsu08g00448 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 271 IPR016965 GO:0016791
Tsu08g00448 273 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Tsu08g00448 273 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 188 - -
Tsu08g00448 273 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Tsu08g00448 273 Gene3D - 1 189 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00448 Tsu-Chr8 4413635 4415298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00448 K13248 - gmx:100785878 471.085