Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00430 ATGTACGGCGGACCTTCCTCCAAATTGGGCCGTGGCGGCGGCCCAAAACGTCTCCACAATTCATTCCCCCCTCCTCCACGTCACCGTCCACCTTCTTCCAACGCCAATTCTCGTCTCTCTCTCGGTGGCTCCGCCAATAAACCACCACCGGCGGTGGAGGAAACTTTCAGTCTTGTATCTGGAAACAATCCCCCCGCTTTCTCTATGATCATAAGACTTGCTCCTGACCTTGTTGAAGAGATCAAGCGCGTTGAAGCACAAGGTGGCACTGCGCGTATGAAATTTGATCCTAACCCAAATAATCCTAATGGAAATATTATTGACTTAGGTGGGAAGGAGTTCAGATTTACATGGTCGAGGGACGGTGATCTATGTGATATTTATGAACAGCGCCAAAGTGGTGTAGATGGTAATGGTTTGCTTGTTGAATCTGGGTGTGCCTGGCGTAAAGTGAATGTACAACGCATCTTGGACGAGTCAACTAAGAATCGCGTCAAAATGCGGTCAGAGGAATACGAACGCAAGCTGAAGTCACGCAAAGCCATTGTTTTGGAGCCTGGGAATCCGTCCACTAAGAGCCAATTAAAGGCATTGACAGCTGTTGAggCTACACCATGGAAGAGTTACACTATAAAGAAAGAGGCTTCACttaataagaaaaagaaagcgGAAACTCTTCAAGTTGGAGGCCCTCCAAAAACCACTCAGAGATCTGGATTGATGTCAACAAGTGCTACTGCTAAGGGCAAACGTTCTTCTCCTCTTACATCTTCACCTGATCATTTTGCTCCTTCTTCCTCTCCACGGGGAGCTTTAAATATCTCTAAAAGCCTTGATGATgctgtgccatcacaaatgacTGACAAGCAAGATATCAATGCTGTCGCTGAGAAAGAAATCCCTACCAGGAAAAGCAATGCTATGAGGAACAAACCAGGAGGCAAAGGGAATAATGGATCTAAACCAATAGATTTGCAGAGCATGTTAACTTCTCTCCTAAAGGATAAACCTAACGGAATGACTATTAAGGCCTTGGAGAAAGCAGTCAGCGACACACTTCCCAATTCCATAAAGGATCTTGAGACCATTATAAAAAGAATTGCAAAATATCATCCCCCTGGAAAGTACATTTTAAAGACAGCGATGGATTCGGAAAGCTCCAAGAAACCTCAGACTGAAAGTGGAAGTTCACCTGAAGAAAATCATAACCAAACACCTGCCCGTGAAGAGTTTCATAATCAGACATCAGCCCCACATGGCGGTGTCGAAGAGAAAGTTCCAAATGACGATTTGGTGGAAACGATTCAAGTAAAATCCCCAGTAGAAGAAGAATCAAACACATTGGAAAAAATTGACATGCAACATGCTTCACCTGATATATTTGGTGGCAAAAAAGGTTCTGATTTTAGTGAAGTGAGGGCAGGCAGCTCTAGTGCTAGTGGAAGTGATAGTGATAGTGAAAGTAACAGTAGTGACAGTGGAAGCGACAGTGGAAGCCATAGTAGGAGCAGAAGTAGAAGTCCAGCTGGATCAGGGAGTGGGAGTAGTAGTGACAGTGAAAGCGATGCGTCATCCAGCAGCAAGGAGGGATTGGAGGGTTCTGATGAGGACGTAGATATTATGAGTGATGATGAAAAAGAGCCAAAGCACAAAGCAGAAGCCTGTGATCAAACGATGTCCTTACCGATTCCAGTAAAATCTCCTGATGGAAGATCTGTGCAGAATGAGGTTGATGAGAAGCAGGATGGTAATGAATCTGATACAGTTGATATTGAAAAAGACTCACCTGAGGGACATGAAGCTACAATGGTGCTAACTGCTGATACCATTTCTGATAAAGTTGGAAAAAATGCAGAAGAGACAAAGCCTTTTTCACCTGATTATCAACAGCTCCAGGAGCGCAAAAATTATATAGGGAGTTTGTTTGATGAAAGGGAAAGTGAAGTCAAAGATAGCTCTAGGAACGAACAGTCTGACAGCTCTGATAGGCTATCTAAAGGTAAACATAAGAGGGGTTCCGAATTGAAGAACATTGACGAGAAATCTGGACGTACAAAGAGGTTGAAAGCAGGAAACTCGACTCGTGAATCATATTCTCCGGGTACAGATGTGCAAATGTTTGGGAACTCTAGAAATTTTTCTCCTTTCGAATTTACTGAAGACACTGGTAAGGGCCCCAATACTCAAGTTGGGAATAGAGCTGACAGACAAGGAAACTCCAATCTTGGTTTCCAGAAAGGATTCAATCGAGCATTGCCTGGAAAATCTAGTTTGGATTTACCACAAACAGGTCAAAGGTCGTTTGACCAAAGTCCTCAAGGAAACCCTTCCTATCCATTGGAAAAATCAGATAAACCTGGTGAAAACATAAGGCACAATAGGAAACACTCAGGAAAGGACTTCCGTGCACGTGAAATTTCTAATGTGCTGGAAAATAAATCTCAGAGAGATGCTCAAAATGAAGATATTTATGCCACCGAGAAAAAAGTCCCCAAGAATTCCAGGGATGGAAGTAATGGAAGTAAGCAGTCACTGTTATCCATGGATTCTAATTACCAAAGACAAGGTGAAATGGTTGGTAAGTTCAAGGAAGGCCGACAAGGTACACAGTCACATTTGGGAACATCGCCCAAGGATAACAATAGAACTGGTCTTAATAAATCCCCTGCTGTTAATGGGCGAGGTATCTCACTTCAAAGAGAGCTTTCAGACTTAGAGTTGGGAGAACTTCGCGAGTCCACTCCTGATGAAACCATTGTTGCAAAGCAATTTGAACGAAAAGGTTCATTTAAGCATATGGAAAACAAAGCAAATACTTCAGAGGACGTGAATTCAAATATTGCTAAAGTAAAACCTTCATTGAAAGCAACTTTAGATTCTGGAAGGCCGACCTCAGTGTTAAGTTCAGGTTTTCCAAGCAATTTggaaaacacaaataaaaagaatgtaGATTGTCATTTGGAAGATCCAACAAAGTCTCGTTCTAGAGTTATGCTAACTCAATCGCAACCTTTGAAAGCAGATAACGCGGACATTGGATCTCAAAACAAATTGACAGAAATGAGTACCAAATTTAGAAATAGTGAATCCGGGATAAGCCATGATATTGATTTGGATGGTCGCAGGGAAAGCAATAGAAGAGTGCCTGCAAATGGTTCTAAGCAAGGCACAAAACGTGGAATGGTTTCCTACCCTGTGAAAGAAAGTAAAAGACAAACACCTAATTCAGGTGAAGAGGTGCCTGAAGGAAGAAAGGATTCAGTATTTGTAGATAGAAGTAATGGTGACCTAAAGAAGAGAGAATCCTCCTCAGATGAAAATAGTTGCTCTTATTCAAAGTTTGAAAAGGAGGAACCTGAATTAAAGGGACCTATAAAGACTTTCTCCCAGTATAAAGAATATGTGCAGGAGTACCAGGATAAATATCAGAGTTACGTCTCCTTGAACAAGATTTTGATGGATTACAAGGATGAGTTTGGCAAACTAGGTGTTGAGTTAGAAAATGCTGAAAGAAGTGGGGATCAGGATAGATATGATGACATTGCAGCACAAATTAAGGAATCCTATAGGCGATGTGAATCGAGACACACAAGACTGAAGAAAATATTTCTTGTGCTTCATGAAGAACTGCTgAGTACCAAACAAAGGATCAAAGACTTTGCTGACTGGTATAGAGATAGAGACTGA 3687 0.4142 MYGGPSSKLGRGGGPKRLHNSFPPPPRHRPPSSNANSRLSLGGSANKPPPAVEETFSLVSGNNPPAFSMIIRLAPDLVEEIKRVEAQGGTARMKFDPNPNNPNGNIIDLGGKEFRFTWSRDGDLCDIYEQRQSGVDGNGLLVESGCAWRKVNVQRILDESTKNRVKMRSEEYERKLKSRKAIVLEPGNPSTKSQLKALTAVEATPWKSYTIKKEASLNKKKKAETLQVGGPPKTTQRSGLMSTSATAKGKRSSPLTSSPDHFAPSSSPRGALNISKSLDDAVPSQMTDKQDINAVAEKEIPTRKSNAMRNKPGGKGNNGSKPIDLQSMLTSLLKDKPNGMTIKALEKAVSDTLPNSIKDLETIIKRIAKYHPPGKYILKTAMDSESSKKPQTESGSSPEENHNQTPAREEFHNQTSAPHGGVEEKVPNDDLVETIQVKSPVEEESNTLEKIDMQHASPDIFGGKKGSDFSEVRAGSSSASGSDSDSESNSSDSGSDSGSHSRSRSRSPAGSGSGSSSDSESDASSSSKEGLEGSDEDVDIMSDDEKEPKHKAEACDQTMSLPIPVKSPDGRSVQNEVDEKQDGNESDTVDIEKDSPEGHEATMVLTADTISDKVGKNAEETKPFSPDYQQLQERKNYIGSLFDERESEVKDSSRNEQSDSSDRLSKGKHKRGSELKNIDEKSGRTKRLKAGNSTRESYSPGTDVQMFGNSRNFSPFEFTEDTGKGPNTQVGNRADRQGNSNLGFQKGFNRALPGKSSLDLPQTGQRSFDQSPQGNPSYPLEKSDKPGENIRHNRKHSGKDFRAREISNVLENKSQRDAQNEDIYATEKKVPKNSRDGSNGSKQSLLSMDSNYQRQGEMVGKFKEGRQGTQSHLGTSPKDNNRTGLNKSPAVNGRGISLQRELSDLELGELRESTPDETIVAKQFERKGSFKHMENKANTSEDVNSNIAKVKPSLKATLDSGRPTSVLSSGFPSNLENTNKKNVDCHLEDPTKSRSRVMLTQSQPLKADNADIGSQNKLTEMSTKFRNSESGISHDIDLDGRRESNRRVPANGSKQGTKRGMVSYPVKESKRQTPNSGEEVPEGRKDSVFVDRSNGDLKKRESSSDENSCSYSKFEKEEPELKGPIKTFSQYKEYVQEYQDKYQSYVSLNKILMDYKDEFGKLGVELENAERSGDQDRYDDIAAQIKESYRRCESRHTRLKKIFLVLHEELLSTKQRIKDFADWYRDRD 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00430 1228 SUPERFAMILY occludin/ELL-like 1124 1222 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 1072 1116 - -
Tsu08g00430 1228 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 7 1222 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 784 835 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 229 291 - -
Tsu08g00430 1228 Pfam Occludin homology domain 1123 1221 IPR010844 -
Tsu08g00430 1228 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1116 1225 IPR010844 -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 471 528 - -
Tsu08g00430 1228 Gene3D - 1127 1223 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 1030 1048 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 756 778 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 958 1116 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 381 897 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 994 1029 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 1 53 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 384 412 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 638 691 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 692 746 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 868 893 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 958 980 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 836 854 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 572 599 - -
Tsu08g00430 1228 MobiDBLite consensus disorder prediction 217 322 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00430 - - gmx:102660010 1600.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00430 08 4273874 4284118 Tsu08g00430 08 4273874 4284118 ECH