Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00428 ATGACAGACTACGGGGCAGAACAAGAAATGGAGATTGAAGCATTAGAAGCTATACTTATGGATGAATTCAAAGAAATACACTCTGGTGAAAGTGGTTTAAGCACTTCCAATAGGTGCTTCCAGATTAAAATTACTGCACAGGAGGAAGACGAAGATGTGTCAAGTACTAATCAAGCTCAACTGGCTTTGATCTTCGCACACACAGAAAAATATCCCGATGAACCTCCACTTTTGAATGTGAGCAGTTTGCGTGGAATTGGGTCTGAAGATTTAAGGATTTTGAAAGACAAACTTCAACAAGAGGCATCTGAAAATCTTGGCATGGCTATGATCTACACACTTGTTAACTCAGCTAAAGAGTGGTTGACTGAGCGGTTTACTGAAGACTCGGATGGTGATGCTGAAGCAGAAGAGGCAGCCAAAGAAGATATAGTGATACCTCATGGAGAAGCAGTTACTGTCGAAAGTTTTTTGGCATGGAGGGAAAGGTTTGAAGCTGAACTTGCACTTGAGCGAGCCAAGCTAATGCCAGAGTCTGTGCTTGCTACTCCGAAGGAAAAGAAACTCAGTGGTAGACAGTGGTTTGAAAGTGGAAGGATGAAAGGTGCAGCTATTGTCACCGAGGAATTGGATGAGGACGACGAGGAAGATATtgactttgatgatgatgaggatttCGAAGcagatgatgaagatgatatgCTTGAGCATTATCTCGCTGAAAAATCTGATTCATCCACACATTCTTCCATGCGAGCGAGTTAA 765 0.4039 MTDYGAEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQIKITAQEEDEDVSSTNQAQLALIFAHTEKYPDEPPLLNVSSLRGIGSEDLRILKDKLQQEASENLGMAMIYTLVNSAKEWLTERFTEDSDGDAEAEEAAKEDIVIPHGEAVTVESFLAWRERFEAELALERAKLMPESVLATPKEKKLSGRQWFESGRMKGAAIVTEELDEDDEEDIDFDDDEDFEADDEDDMLEHYLAEKSDSSTHSSMRAS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00428 254 PANTHER RWD DOMAIN-CONTAINING PROTEIN 2 246 IPR040213 -
Tsu08g00428 254 MobiDBLite consensus disorder prediction 208 231 - -
Tsu08g00428 254 Pfam RWD domain 7 122 IPR006575 GO:0005515
Tsu08g00428 254 PANTHER RWD DOMAIN-CONTAINING PROTEIN 1-RELATED 2 246 - -
Tsu08g00428 254 SUPERFAMILY UBC-like 1 124 IPR016135 -
Tsu08g00428 254 MobiDBLite consensus disorder prediction 206 231 - -
Tsu08g00428 254 ProSiteProfiles RWD domain profile. 10 125 IPR006575 GO:0005515
Tsu08g00428 254 SMART RWD2001b 10 125 IPR006575 GO:0005515
Tsu08g00428 254 Gene3D Ubiquitin Conjugating Enzyme 1 130 IPR016135 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00428 - - gmx:100813322 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00428 08 4256319 4263165 Tsu08g00428 08 4256319 4263165 ECH