Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00426 ATGGGTAGTTCTGGAGAATCTAACATCAATGGAATAAATGCTTCTGTGGGTGGTTTGGTTTGGGTTCGACGGCGAAATGGGTCGTGGTGGCCGGGTCGAATAATGAGTCTTGATGAATTGTCTGAGGGTTGTTTGGTTTCTCCAAGATCGGGTACTCCTGTTAAGCTGTTAGGTCGTGAGGATGCTAGTGTGGATTGGTATAATCTTGAAAAATCAAAGCGGGTTAAAGCTTTTCGTTGCGTAGAGTATGCTGACTGCATTGAGAAGGCGAAGGCATCTGCTGCTGGTTTAGGCAAGAAGGCAGTGAAGTATGCTCGAAGGGAAGATGCTATTCTTCATGCTCTtgagctagagagtgctcatCTGGACAAGGTACCCGTACCGTTATGCTCCAGATCAGATAAATCTGGCAGCGAACACGGTGAATCAGCTGGAGGATTACCCGCTATGTCCAATTCTGGTGATGGCAATGAGGATGTGACTGATGATTTGAGTGACTCTGAAGACAATTCTAATTCACCTCCAGAATTGTCACAATCTGGTATATCTTTTGAAGAACCTAATCATAATGGTTCTTTAAAGATTCAACCTATGCAGGGAAGGAGGAGGAGAACACCTAATGATTCAGAAGACGACGGAACTGAAGGAGTGAAGCGAATGAGAGGACTTGAGGACCTCGGCATTGGTGTAGTGTCAAAGAGAAAGGGCCAGGGTTCAGCAGGTCCAACTGAGATAGCTCAACATGTCAGTGCTTCCCTCGACGACTCAATCACAGGGAATGGCCTGGCAAATGGAACTTCTGTAAACGGTGTTAAGGCTTATTCTTCTCTGAAAAGGAAAAGATCACAAGTGGCTAATGCCCATGAActcttgaaaagaaaaaatcgaCGCCGGCCTTTGACAAAGGTTTTAGAGAGTACTGTCATGGTATCAGTTCCTGTCACTTGTGATCAGCTTCCCAGTTCAAGTTCTCCACCATGCGGGATGACTGATGGAAAGATTTCAGGATTAGATTCTACTGATTTAAAGAAAAGTTCTACAATGGAAATTAACAATTCAGATAGTGCTGCCGAGGCTGCTTGTGAGAATGCAACTTCATTAACTGTTCATGACCAGGGTAGTGATTTTCCCCAAATCAATCACAAGGTCAAGGAGAGTGAAACTTCGGAAATACCAGGGCCAGCTGGCAATGATTCTTCTGATATGTTATTTGATGTGCCATTTGTTGGGATAGAGGAGGAGAAACTCACTCCAGGTTTGTCACCCACACTTGTTTCTTGCTCATCCGGCATGCCTCAAGCTAGTGCATTGGAACAACAACCTTGTCAAGCTAGTCAATCGGAAGCTTTCCCATTGAGAAATGGGTTTAAGAATGAATCTGGTAGTACCAGTTCAGCTGTTGGTCACGATATTGTTGGCGATGGAGCAGAAAAAGATAGTTCAAAGTGGCAGTCAAAAGGAAAGAGAAATTTAAGACATACaagtaaaaatagaaaacaagtCTCGAGAAAATATATTGGAATGGATGGCGAATCCAAAGCTTATTTAACAGGAACAAGGAACTCAGATGGATTCTGTGAAGGTGATGGTCAGAAACAGAAAGGTGATTGGAATGGCACGGGTGTATCCAATGCCTCATATAATTGTACTTCTCAAATCAAGTGCAAGCCGGTTGCTGAAGGTCAAGCAGAAGGGTTTCGGGACTTGATCAAGCATATCAGGGTTACAGCAACAGAACCACCTCAGAGATCACTTCCTTATCGCCAGTCACGCTTCACCCTTAACTCCAGATATGAAATGGCAGATTTTCCTGGACGAAACTGTATTGACGGGACATTATACAATGTTAAACTAGAAGCTAAATCCAGCTACCGGCCACAACACGTTCCTTTGGTTTCTCTTATGAGTAAATTGAATGGCAAAGCCATTATTGGACACCCTTTGACAGTTGATGTATTGGAGGATGGTCATTGCGATAAAATGTTGGGCGTCAGTGGAGGCGACATGGAAGTTGGTGATATTTATTGTGCTGAGAAGCCAAAACAAGTAACCAGAAGAACGCCTTCTAAGAAATCATCACGTTTTTCACGTAGGAAATCTTCGAAGTCAAAGAAATCTGGgctgttgaataaaaaaatccgGAAGTTGTCCTCGTTGACAGGTCACAGACAGTCAGAAGAGGAGAAAAAACCGGTGGTAGATAAGCTTAAGGGTCCTGTTATAGCTTGTATTCCTCTTACAATAGTATTCAGTAGGATACACGAGGCAGTGAGCGGTCAGGCAAGGTCGACACACCGTGCAGTATCAGCAACCAACAACCCATGA 2325 0.4258 MGSSGESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSEGCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCVEYADCIEKAKASAAGLGKKAVKYARREDAILHALELESAHLDKVPVPLCSRSDKSGSEHGESAGGLPAMSNSGDGNEDVTDDLSDSEDNSNSPPELSQSGISFEEPNHNGSLKIQPMQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVSKRKGQGSAGPTEIAQHVSASLDDSITGNGLANGTSVNGVKAYSSLKRKRSQVANAHELLKRKNRRRPLTKVLESTVMVSVPVTCDQLPSSSSPPCGMTDGKISGLDSTDLKKSSTMEINNSDSAAEAACENATSLTVHDQGSDFPQINHKVKESETSEIPGPAGNDSSDMLFDVPFVGIEEEKLTPGLSPTLVSCSSGMPQASALEQQPCQASQSEAFPLRNGFKNESGSTSSAVGHDIVGDGAEKDSSKWQSKGKRNLRHTSKNRKQVSRKYIGMDGESKAYLTGTRNSDGFCEGDGQKQKGDWNGTGVSNASYNCTSQIKCKPVAEGQAEGFRDLIKHIRVTATEPPQRSLPYRQSRFTLNSRYEMADFPGRNCIDGTLYNVKLEAKSSYRPQHVPLVSLMSKLNGKAIIGHPLTVDVLEDGHCDKMLGVSGGDMEVGDIYCAEKPKQVTRRTPSKKSSRFSRRKSSKSKKSGLLNKKIRKLSSLTGHRQSEEEKKPVVDKLKGPVIACIPLTIVFSRIHEAVSGQARSTHRAVSATNNP 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00426 774 MobiDBLite consensus disorder prediction 686 711 - -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 201 222 - -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 167 195 - -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 681 732 - -
Tsu08g00426 774 Pfam PWWP domain 18 107 IPR000313 -
Tsu08g00426 774 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 1 769 - -
Tsu08g00426 774 Gene3D - 7 118 - -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 453 467 - -
Tsu08g00426 774 SUPERFAMILY Tudor/PWWP/MBT 15 119 - -
Tsu08g00426 774 Coils Coil 277 297 - -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 472 486 - -
Tsu08g00426 774 PANTHER T17B22.17 PROTEIN-RELATED 1 769 IPR044679 -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 453 502 - -
Tsu08g00426 774 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Tsu08g00426 774 MobiDBLite consensus disorder prediction 130 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00426 Tsu-Chr8 4235753 4241231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00426 - - cam:101497471 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00426 08 4235753 4241231 Tsu08g00426 08 4235753 4241231 ECH