Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00423 atgaatGAGAATGGAAATGAAGAACCTGTATTTGAAATTGGGGTGGTGATTCCGAAGAGGATCACACAAGAAAATGATGATTCTTCTGACTGTGCTCATGTTCTTATTGAGGAATTTAAGAAAGTGGGGTTTGTAGTTGAGAAAGTTATTGGCATTGCAGATGAGTTTATTAAGTTGGCTGCACCTTTGGAAACTTTAGGGAGAGCTGCAGCTGAACTACAAATCATGAAAAGGACTCATATAGGTATGGATTTACAATTTGAGGTGGAGGAAGTTGAAGCTTTTGTGAAACAACCTGACGGTTCTGTTTTCAGCTGGTGTGAGCGTTTTCATTGCTACTGTCATTTGATATATGGAATAGTAAACAACAGCAAGTCAGCGAAAACCCTTACATTTGATGGAAAAGAAATCTTTTGGGAAATCGGGGAGAATCTGATTCAAAAATTGGAATCGGAGAACATTGTCAAGCAAGTTTTTCCTTTGCATGATGAAAAGGCAAGAAAGAAACTTCTCAGGACTTGGGCTCTTCGTTGGTGGGACTTTACGAATCAGCCAATCGATGACATTTATCCATATTATGGGGCAAAGATTGCAATCTATTTTGCTTTTCTTGGAATGTACACACGATGGCTGTTCGTCCTCGCGGCATTTGGTCTTACATTGCAACTGATTGATTTTAGGTCAATGAAATTAGTAGTGCTTCCTGTTTTCTTTGTCGTAGTGATACTTTGGGCTATAATGTTTTGTCAATTCTGGAAACGTAAAAATTCAGCACTTCTAGCCAGATGGCCTCTTAGTTCTGCAGCTTCAGCTGATCCGGGGTACAAGATTCCAGGAAGGAAGGACAGTTCCCTACAGTCGCCAATGGAACTCATTAAAGTATTTGAGGCTGATAGAGTAAAAGGGAAGGAAGTATTTCAGAGATATGAGTGGTTAGGGCGTTTTATGAGATTCAGAAACGATGCTATCATTATCTTCAGCATAATATGTCTCCAGTTACCTTTTGAGTTGGCGTACGCACATCTTTACGGAGTTATTAGTTCGGATGTAATGAAGTTTGGGCTCACTGCTGTTTACCTTTTCGCCATTCAGTATATTACTAAGATTGGAGGCCAGGTATCTGTCAAACTTatcaaaaatgaaaacaacGAAAACACAGAAAAGCGTGCCGACAGCTTGGTCTACAAGGTGTTTGGTCTGTATTTCATGCAAACATACATTGGAATTTTTTATCACGCCATGTTGCACCGTAACTTTTCAACTCTTCGCAAAATTTTGATTCAGCGGCTACTTCTTTCTGAGGTGTTGGAAAACTTGGTGGAAAATTCATTGCCTTATCTCAAATACAGCTATAAAAAGTACAGCGTTAGACacaagaagagagagaaaggagaATCAACAGATAAATTTCAGTTTAGTTCTAGAGTAGAGAAAGAATACCTCAAGCCTACTTACTCTGCAAGCATCGGCGAGGAGCTTGAAGATGGGTTATTTGATGATTTCTTGGAGTTGGCATTGCAGTTTGgaatgattttgatgtttgcTTGTGCATTCCCACCTGCATTTGCTTTTGCTGCTGTGAACAACATTATGGAAATCAGGACAGATGCACTGAAGCTGCTGGTAATTTTTAGACGGCCTGTTCCTCGTGCCGCTGGAACAGTTGGAGCCTGGCTTAACATATTTCAGTTTCTCACATTGATGTCAATTTGCACCAACTGTGCACTTTTAGCATGGCTATACGACGAGGAAGGAAAGTGGAAAGTAGAACCTGGACTTGCAGCAATATTAATCATGGAACATATCCTTTTGTTGATTAAGTTCGGCTTTCCTCGCTTGGTTCCTTCGGAACCTGCTTGGGTAAGAGCGAACCGTGCGAAGCACACTACACAGGCACAGACTTTGTGCTCTAAGAAACTTTTAAGGACAATTTCTGGAGGAGAAAAGAGAGGAATGAAGATGAAGACAGGCTAG 1974 0.3946 MNENGNEEPVFEIGVVIPKRITQENDDSSDCAHVLIEEFKKVGFVVEKVIGIADEFIKLAAPLETLGRAAAELQIMKRTHIGMDLQFEVEEVEAFVKQPDGSVFSWCERFHCYCHLIYGIVNNSKSAKTLTFDGKEIFWEIGENLIQKLESENIVKQVFPLHDEKARKKLLRTWALRWWDFTNQPIDDIYPYYGAKIAIYFAFLGMYTRWLFVLAAFGLTLQLIDFRSMKLVVLPVFFVVVILWAIMFCQFWKRKNSALLARWPLSSAASADPGYKIPGRKDSSLQSPMELIKVFEADRVKGKEVFQRYEWLGRFMRFRNDAIIIFSIICLQLPFELAYAHLYGVISSDVMKFGLTAVYLFAIQYITKIGGQVSVKLIKNENNENTEKRADSLVYKVFGLYFMQTYIGIFYHAMLHRNFSTLRKILIQRLLLSEVLENLVENSLPYLKYSYKKYSVRHKKREKGESTDKFQFSSRVEKEYLKPTYSASIGEELEDGLFDDFLELALQFGMILMFACAFPPAFAFAAVNNIMEIRTDALKLLVIFRRPVPRAAGTVGAWLNIFQFLTLMSICTNCALLAWLYDEEGKWKVEPGLAAILIMEHILLLIKFGFPRLVPSEPAWVRANRAKHTTQAQTLCSKKLLRTISGGEKRGMKMKTG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00423 657 Pfam Calcium-activated chloride channel 189 627 IPR007632 -
Tsu08g00423 657 PANTHER BNAC06G23840D PROTEIN 3 645 - -
Tsu08g00423 657 PANTHER NGEP-RELATED 3 645 IPR007632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00423 Tsu-Chr8 4223065 4228942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00423 K19327 - gmx:100817965 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00423 08 4223065 4228942 Tsu08g00423 08 4223065 4228942 ECH