Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00419 ATGAAGTTTAGTAGTAACAAGATCTTAGATTTAATTGGAATTTGGAAGAAGGGAGAAGGAGAAGgagaaggagagaaaaaaaCTATGCAGTCTAGAATGGAGGAAGGGAAGGACCCTGCTGCAACAAGAGTCACACACTCTAGGCCATTTCCTTTGAGACTTTTGCAATTTTTCTTACTCTTTTTGGTTATTGGAATTGGTGGTTCATTTCTTAGCATGTATATGATTAGGCATTTTGGTATTCATAATGTGGATTTCGTACAATCGTCGATTAAGCCTTGTTTTCAGAAACCGGCGATTGTAGAGAATTGGTTTAAGCCTCCATCTAGTTTGTTGCATAATATGACTGATGAGGAACTCTTTTGGAGGGCTTCTTTTGTTCCGAGGATTAAGAATTATCCTTTTAAAAGAACTCCTAAAATTGCCTTCATGTTCTTGACTAAAGGACCTTTGCCTATGGCACCACTTTGGGAGAAGTTCTTTAAAGGACATCAGAAGCTCTATAACATCTATGTTCATTCACTGCCGTCTTATAATGCTGATTTTTTGCCGTCGTCAGTTTTTTACCGGAGACAGATCCCTAGCCAGGTGGCAGAGTGGGGAATGATGAGTATGTGTGATGCTGAAAGAAGACTTCTAGCTAATGCATTGCTTGATTTCTCAAATGAATGGTTTGTGCTTCTATCTGAGTCCTGCATCCCTCTCCAAAACTTCAGCATTATTCACCGTTACTTATCGCGATCAAGGTATAGCTTTATGGGTGCATTCGATGAACCTGGTCCATATGGAAGAGGACGTTACGATGAAAACATGGAACCTGAAATCAACATGAGTGACTGGCGTAAAGGGTCTCAGTGGTTCGAAATTAACCGAGAACTTGCTGTTAGGATAGTTGAAGACGTAACTTATTATCCAAAACTCAAAGAATTCTGCTTACCACACAAATGCTATGTTGATGAACACTATTTCCAGACAATGTTAACCATTAATACTCCTCATCTTTTGGCGAACCGGAGTCTCACTTATGTTGATTGGTCAAGAGGTGGTGCTCACCCTGCTACCTTTGGAAAGGATGACATCAATGAGGAATTCTTCAAGAGAATTTTGCAAGATCAGAATTGTCTTTATAATAACCAGCAAATTTCACTTTGTTtcttatttgcaagaaaatttGCACCTAATGCTTTAGATCCTCTTTTAGATATAGCGCCGAAAGTTCTAGGAATAGGAAAGTTGAAGAAACCTTGA 1248 0.3822 MKFSSNKILDLIGIWKKGEGEGEGEKKTMQSRMEEGKDPAATRVTHSRPFPLRLLQFFLLFLVIGIGGSFLSMYMIRHFGIHNVDFVQSSIKPCFQKPAIVENWFKPPSSLLHNMTDEELFWRASFVPRIKNYPFKRTPKIAFMFLTKGPLPMAPLWEKFFKGHQKLYNIYVHSLPSYNADFLPSSVFYRRQIPSQVAEWGMMSMCDAERRLLANALLDFSNEWFVLLSESCIPLQNFSIIHRYLSRSRYSFMGAFDEPGPYGRGRYDENMEPEINMSDWRKGSQWFEINRELAVRIVEDVTYYPKLKEFCLPHKCYVDEHYFQTMLTINTPHLLANRSLTYVDWSRGGAHPATFGKDDINEEFFKRILQDQNCLYNNQQISLCFLFARKFAPNALDPLLDIAPKVLGIGKLKKP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00419 415 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 32 407 IPR044174 GO:0016757
Tsu08g00419 415 PANTHER - 32 407 - -
Tsu08g00419 415 Pfam Core-2/I-Branching enzyme 141 368 IPR003406 GO:0016020|GO:0016757
Tsu08g00419 415 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00419 Tsu-Chr8 4200844 4203030 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00419 - - mtr:MTR_8g015500 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00419 08 4200844 4203030 Tsu08g00419 08 4200844 4203030 ECH