Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00418 ATGAAACCTGCAAAACAAGTTACCAAAATTCAGCAAGATAATTTCATCAACAAGAATTATCTAAAAAAACTTGATGGTGAAGATGCTTTTATAGTTCCTGCTTCTGTTCATGTGAAAAGTTCATGTTCTGGCAACATCGATAATGGCAAAGATGAAGATGATAGGCTTACTCGTTGCAATTTAAGTTGTTCGCTTAAAAGTCTAAATTCATTTAGAAAGGCGATGAACTCACGTGAAGATATAGAACTAAAATCAGCACAATATGGAAAGAACCAAATGGAAGAGCATAAAGATGAGAATCAAATTGATCAGAAGGCAGAAGAGGAAAAACCTTCTCACTCATTAAATGGTTTTGATGAGACGACAAATGCATCTTTAAACTCATCGGTTAAAGATAGGACTTCTGAATCAAAGAAGAAAGAACATAGATTCATGAAGgaagaaactaaaaatatttcaCTAGATAGCTTGAAAACATTGCAAGGTAGCAATGGTCTAAGACATGAAGATCATGAAACTTTTGTAGACAAAATCAATTTAAGGGATCATTGCATGGAGAATACAGCAATGAGTGATGTCCAAAAATGTTCTGGTGAGTTAGAAATCGGTAGGAGGTCCTTACATGGCAAGAGAGAGAGGAATAAAGAAGAGGAGACTAGTAGAAATTATGACGCCTTGAATAAATCCAGCTCTGAATGTAGATTTGGTATGGATATCAACCCTGACGATGTCGTAGGACTTATAGGTGAAAAGCAATTTTGGAAAACAAGAAGAACTATCATCAATCAACAGAGAATCTTCTTCATGCAAGTGTTTGAGTTGCATAGACTTATAAAGGTGCAACAATTAATTGCAGGATCACCACATCTATTGTTTGAAGATAAACTTGTACTTCACAAACCACCAATGAAAACATCCTCTTCCAAGGAATTACAATCTGACTTTGTCGGTGAACAAACGTCGACAGCTTTTAAACTCGACAATAAGTCCGAGAAGGCCACTACTTCCGAGGATGTTGAAAACAATGCAGTTGGAAAGATTTCCTTTCCTTGTGCCAACAGCATCAGCAAAGAACATAATCACATTTCAAATTATAGCAATCATCATTTCGGAAACCTTGCATTAGCCTCTGCAGATAAAAATTCCACTTCCAATTCCAAACAGTCACCGAGCATTGTCTACCCTCCACCACCGCCACCACCACCAAACCAATGGTTAGTTCCTGTCATGTCTCCATCTGAAGGTCTTGTATATAAGCCAATCATTGGACCATGCCCTCCAAACGCGGGTGGCATCATGACACCGTTATACGGTGCAATGAGCTTTAATACAGGAAGCAAAGATGTTTTAGATCCATCTCTTACGACAAGTTTTCATCAAAAGATTCGAATCCTTTCTGGTTCGTCATTACCACCATTATTACCACCACCATGTGTTCCATCATTCATGCATAGATCAATATCAGCTTCATCTCTTGAACAAATGGGACAATCTAATGGTCCTAAAAATCACTACTCATCTGCAGAACTCAATTCAGCCATATTGTATCAAAATCCATCTAACATATccactcaaataagtcaattttcAAGAAACTTTCCATCTTATCAAACATTGGAAGATAATAAAGAACTACAAATAAGTACAAATAGTAGTCCATCCAAGAGAATGAAACGAGACGAACTTCCTTTGTTTCCAGTAGCACCGACCTTTTGGTCATCACCGGATCGTGACTCGAGCGTTGAACATCACTCAAGAGTAATAAAAGCTCTTCCTCATAATCCAAAATCAGCAAGTGAATCAGCAGCCAAGATATTCAAGTCAATACAAGAAGAAAGGAAATTTTTTTGA 1851 0.3663 MKPAKQVTKIQQDNFINKNYLKKLDGEDAFIVPASVHVKSSCSGNIDNGKDEDDRLTRCNLSCSLKSLNSFRKAMNSREDIELKSAQYGKNQMEEHKDENQIDQKAEEEKPSHSLNGFDETTNASLNSSVKDRTSESKKKEHRFMKEETKNISLDSLKTLQGSNGLRHEDHETFVDKINLRDHCMENTAMSDVQKCSGELEIGRRSLHGKRERNKEEETSRNYDALNKSSSECRFGMDINPDDVVGLIGEKQFWKTRRTIINQQRIFFMQVFELHRLIKVQQLIAGSPHLLFEDKLVLHKPPMKTSSSKELQSDFVGEQTSTAFKLDNKSEKATTSEDVENNAVGKISFPCANSISKEHNHISNYSNHHFGNLALASADKNSTSNSKQSPSIVYPPPPPPPPNQWLVPVMSPSEGLVYKPIIGPCPPNAGGIMTPLYGAMSFNTGSKDVLDPSLTTSFHQKIRILSGSSLPPLLPPPCVPSFMHRSISASSLEQMGQSNGPKNHYSSAELNSAILYQNPSNISTQISQFSRNFPSYQTLEDNKELQISTNSSPSKRMKRDELPLFPVAPTFWSSPDRDSSVEHHSRVIKALPHNPKSASESAAKIFKSIQEERKFF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00418 616 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 6 615 - -
Tsu08g00418 616 MobiDBLite consensus disorder prediction 86 115 - -
Tsu08g00418 616 MobiDBLite consensus disorder prediction 116 131 - -
Tsu08g00418 616 MobiDBLite consensus disorder prediction 86 143 - -
Tsu08g00418 616 PANTHER PROTEIN EARLY FLOWERING 3 6 615 IPR039319 GO:2000028
Tsu08g00418 616 MobiDBLite consensus disorder prediction 379 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00418 Tsu-Chr8 4189792 4194121 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00418 K12125 - gmx:100820110 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00418 08 4189792 4194121 Tsu08g00418 08 4189792 4194121 ECH