Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00411 ATGGCAAGTGTTCTAGGATTTTCTTCAACCATTGTCACTTCCTATGAATCTAGGAATGAACCAAAACTATGTACTAAATTCTCTGCAAAAACTTGTTCTACACTTTGTTTTTCTTGGATTAACCACCATGGAAAGAAGGGTAGAAAACATTTTCAGCTCAGATCCTCAAATGGGCATCCTCTAAATGCTGTTTCTTCTCATGATGGTTTAGCTGGAAGTTCATTGGCCAAAGAAGATGGCCAGCCTCAACAAGTGGAAGACTCATTTTCcttttcagactctgaatccGCAGGACCCAACCTTAGTATAACCGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCACTCTTTGCTCTTTTTTATGAAGATTGGCTACCTGAGAATTTTATTGTGTTTGGATATGCTCGGACTAAAATGACCGATGAAGAGTTAAGGAACATGATAAGCCAAACTTTAACATGCAGAATTGACAAGAGAGCAAATTGTGCAGATAAAATGGatcaatttttgaaaagatGCTTTTACCATTCTGGTCTGTACGATTCTGAAGACAACTTTCTAGATTTGGATTCCGAGCTGAAAGAGAGAGAGGGTGGAAGACCTTCAAACAGGTTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGTGGTGAGATGTGCTAGCCTGaaagcttcttcaaaaaatggCTGGACAAGGGTTATTGTCGAAAAGCCGTTTGGTCGTGATTCTGAATCCTCTAGTGAGCTAACAAGAAGTTTGAAGCAGTACCTCGCTGAAGACCAAATATTCAGGATTGACCATTACTTAGGTAAGGAGCTTGTGGAGAATCTCTCGGTGCTTCGTTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGAATTACATTCGTAATGTGCAGCTAATATTTTCTGAAGATTTTGGAACAGAAGGAAGAGGAGGttattttgataattatggAATCATTCGTGATATAATGCAAAATCACCTTGTGCAAATACTAGCACTGTTTGCAATGGAACCACCTGTCAGCTTGGATGCTGAGGACATCAGAAATGAGAAGGTGAAGGTTCTGAGATCAATGAAACCAATACTGCTTGAAGATGTTGTAGTTGGTCAATATAAGGGCCACAGCAAGGGTGGTAAATCATATCCTGCTTATATAGATGACTCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCTGCAGCGGCTCTTTTTATTGGCAATGCCAGATGGGATGGAGTTCCTTTTCTCATGAAAGCCGGCAAGGCTCTTCATACTAAACGGTATGGAATATTTCATCTCTCTATAGGAAAAATGTGA 1350 0.3822 MASVLGFSSTIVTSYESRNEPKLCTKFSAKTCSTLCFSWINHHGKKGRKHFQLRSSNGHPLNAVSSHDGLAGSSLAKEDGQPQQVEDSFSFSDSESAGPNLSITVVGASGDLAKKKIFPALFALFYEDWLPENFIVFGYARTKMTDEELRNMISQTLTCRIDKRANCADKMDQFLKRCFYHSGLYDSEDNFLDLDSELKEREGGRPSNRLFYLSIPPNIFVDVVRCASLKASSKNGWTRVIVEKPFGRDSESSSELTRSLKQYLAEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLVQILALFAMEPPVSLDAEDIRNEKVKVLRSMKPILLEDVVVGQYKGHSKGGKSYPAYIDDSTVPKGSLTPTFAAAALFIGNARWDGVPFLMKAGKALHTKRYGIFHLSIGKM 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00411 449 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 273 279 IPR019796 GO:0004345|GO:0006006
Tsu08g00411 449 Gene3D - 98 271 - -
Tsu08g00411 449 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 105 283 IPR022674 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 72 440 - -
Tsu08g00411 449 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 100 448 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 101 438 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 72 440 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 286 439 IPR022675 GO:0004345|GO:0006006|GO:0050661
Tsu08g00411 449 Gene3D Dihydrodipicolinate Reductase; domain 2 273 443 - -
Tsu08g00411 449 PRINTS Glucose-6-phosphate dehydrogenase signature 420 446 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 PRINTS Glucose-6-phosphate dehydrogenase signature 239 252 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 PRINTS Glucose-6-phosphate dehydrogenase signature 263 291 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 PRINTS Glucose-6-phosphate dehydrogenase signature 315 332 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 PRINTS Glucose-6-phosphate dehydrogenase signature 333 349 IPR001282 GO:0006006|GO:0016614|GO:0050661
Tsu08g00411 449 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 286 IPR036291 -
Tsu08g00411 449 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 273 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00411 Tsu-Chr8 4120718 4128543 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00411 K00036 - gmx:100801945 722.62