Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00394 ATGTATAGAGCTACAGCTTCATCACTCAAAAGGCATCTCAAGGGCCGTGGTGGCAACTTGGGAGCAACTAGGTATGCTACTTCAAGTGCTGTAGCTGCAAAGGTTTCCTCTGGTGGTTTGTTTAGCTGGCTTACCGGGGAGCGTTCTAGTTCACTTCCACCTCTTGATACACCACTTAGTTCTGTTGTTCTTCCTGATGTGCTACCAGATTATGTTGAACCAAGCAAGACTAAGATTACAACTCTTTCTAATGGACTTAAAATTGCTTCAGAGACCTCGTCGAACCCTACAGCATCAATTGGGTTATATCTCGATTGTGGTTCAATCTACGAGACACCATTGACAAGTGGGGCTTCACATTTGCTAGAGAGAATGGCTTTCAAGAGCACGGTTAACCGTAGTCACTTTCGTATTGTAAGGGAAATAGAAGCAATTGGTGGTAACATAGGAGCCTCGGCCTCTCGGGAACAAATGGGTTACACATTTGATGGCTTAAAGACCTATGTTCCAGAAATGGTTGAATTACTTATTGACTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGagCTACGAAAAGTGAAAGCAGAGCTTGGAGAACTCACAAACAATCCCCAGGGCTTGTTATTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAAGAAGCACTGAACAGATTGGATGGCCCCAGTTTAGAGGAATTTGTCGCTGAAAATTACACAGCTCCTAGAATGGTACTTGCTGCATCTGGAGTAGAGCATGAAGAGCTTCTAGCTGTTGCTGAGCCACTTCTTGCTGACCTACCAAGTGTTCCTCGTCCCGAAGAACCAAAATCTACCTATGTTGGAGGTGATTTCCGTCGTCACGGTGAACCAGGGACTACACATTTTGCTATTGCTTTTGAAGTTCCCGGTGGCTGGCAAAAGGAGAAAGATGCTATAGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGTTCATTCTCAGCTGGGGGCCCCGGTAAAGGGATGCACTCAAGGCTATTTCTTCGCGTGTTGAATGAATATCAGCAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGATTATTTGGCATTTATGCGAGCACTAGCCCTGATTTTGTACCAAAAGCTGTAGATTTAGCTGTACGAGAACTAATATCAATTGGAACACCAAACCAAGTCTCAGAGACAGCGCTTCACCGTGCCAAGGAATCCACAAAAACTGCAGTTCTTATGAATCTGGAATCTAGAATGATCGCCTCAGAAGACATAGGAAGGCAGGTTTTGACTTACGGAGAAAGGAAACCTTTGGAGCAGTTCTTGAAGGCTGTAGATGAAATCACTATAAGTGATCTCGCTAAAATGTCTAAAAAGATTATTTCCTCACCTTTGACTATGGCATCATATGGAgatgTTATTACTGTTCCGAGTTATGAATCTGTGAGCCGCAAGTTCCATGCGAAATGA 1521 0.4366 MYRATASSLKRHLKGRGGNLGATRYATSSAVAAKVSSGGLFSWLTGERSSSLPPLDTPLSSVVLPDVLPDYVEPSKTKITTLSNGLKIASETSSNPTASIGLYLDCGSIYETPLTSGASHLLERMAFKSTVNRSHFRIVREIEAIGGNIGASASREQMGYTFDGLKTYVPEMVELLIDCVRNPAFLDWEVNEELRKVKAELGELTNNPQGLLLEAIHSAGYSGALAYPLLAPEEALNRLDGPSLEEFVAENYTAPRMVLAASGVEHEELLAVAEPLLADLPSVPRPEEPKSTYVGGDFRRHGEPGTTHFAIAFEVPGGWQKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLFLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFVPKAVDLAVRELISIGTPNQVSETALHRAKESTKTAVLMNLESRMIASEDIGRQVLTYGERKPLEQFLKAVDEITISDLAKMSKKIISSPLTMASYGDVITVPSYESVSRKFHAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00394 506 Gene3D - 291 503 - -
Tsu08g00394 506 Gene3D - 70 278 - -
Tsu08g00394 506 PANTHER METALLOPROTEASE 19 505 - -
Tsu08g00394 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Tsu08g00394 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Tsu08g00394 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Tsu08g00394 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Tsu08g00394 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 300 497 IPR011249 GO:0046872
Tsu08g00394 506 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 19 505 IPR037715 GO:0006627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00394 Tsu-Chr8 3841040 3846135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00394 K01412 - gmx:100794691 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00394 08 3841040 3846135 Tsu08g00394 08 3841040 3846135 ECH