Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00392 ATGAAGATTttcttgattttcatttttgttacaCTCTTAGCAACATGCCATGGTAATGTTCTAAACAATGAACATGGTTCATCTAACAAAATTTTCCCACTTAGAGTGAAAACTGGTTCAGGTGGACACTACATTCAAGAAGTGTCATGTTCTAGTTGGAGACTTGGTGTTGAAGCACACAACGTTATAAATTGGAAAACTGTTCCAATAGAATGTGAAAAATATGTTGGAAACTATATGTTAGGTGATCAATATAGAGCTGATTCTAAAGTTGTTAACCGTGAAGGTTATTTCTATGCTAAGAGTCTCAATCTAAGTAGAGATGGTAAAGATATATGGGTTTTTGACATTGATGAAACTTCATTGTCTAATCTTCCATATTATGCTAAACATGGATTTGGGGTGAACCCATACAACGACACATTATTCAATGAATGGGTTGATCTTGGAGCAGCACCAGCACTGCCAGAGTCTCAAAAATTGTACAAAAAGTTGTTGAATCTTAATATCAAGATTGTTTTCTTAACAGGAAGACCACTCAAACAAAAAGACATTACAGCTAAGAACTTGAGACAAGCTGGCTACCACACTTGggaaaaactaattttaaaGGACACAACAATATATCATGGTAAAACAGCAGTTACATATAAATCATCTGAGAGAAAGAAGCTAGAGGAAGAAGGTTACAGAATCATTGGAAACATTGGTGATCAATGGAGTGATATTCTTGGAACAAACACTGGAAGTAGGACTTTCAAGCTCCCTGATCCTCTCTATTACATTGCTTAA 792 0.3409 MKIFLIFIFVTLLATCHGNVLNNEHGSSNKIFPLRVKTGSGGHYIQEVSCSSWRLGVEAHNVINWKTVPIECEKYVGNYMLGDQYRADSKVVNREGYFYAKSLNLSRDGKDIWVFDIDETSLSNLPYYAKHGFGVNPYNDTLFNEWVDLGAAPALPESQKLYKKLLNLNIKIVFLTGRPLKQKDITAKNLRQAGYHTWEKLILKDTTIYHGKTAVTYKSSERKKLEEEGYRIIGNIGDQWSDILGTNTGSRTFKLPDPLYYIA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00392 263 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 42 262 IPR005519 -
Tsu08g00392 263 CDD HAD_VSP 76 262 - -
Tsu08g00392 263 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 6 262 - -
Tsu08g00392 263 SUPERFAMILY HAD-like 105 258 IPR036412 -
Tsu08g00392 263 TIGRFAM plant-AP: plant acid phosphatase 45 263 IPR010028 GO:0003993
Tsu08g00392 263 PIRSF VSP 1 263 IPR014403 -
Tsu08g00392 263 Gene3D - 45 263 IPR023214 -
Tsu08g00392 263 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00392 Tsu-Chr8 3826469 3830140 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00392 - - gmx:547669 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00392 08 3826469 3830140 Tsu08g00392 08 3826469 3830140 ECH