Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00388 ATGGGAAAAGTGGTGGTTTGTGCGACGGTGATCGGAGCTACGGCGGCATGTGCGGTGGCGACAGTATTAATACATCGTTACGTCAAGAAATCGAAACGATGGGGAAAAGCAAAAGCGATTCtgaaagaatttgaagaaaaatgcgCAACACCGACGTTGAAGCTGAAACAGGTTGCTGATGCAATGACGGTGGAGATGCACGCCGGTCTTGCTTCTGAAGGTGGTAGCAAACTCAAAATGCTCATCAGTTTCGTTGATAATCTCCCTACAGGGAATGAGGAAGGACTATATTATTCCTTGGACCTTGGAGGGACTAACTTTCGTGTATTACGCGTGCAACTCGGTGGCAAGGATGGTGTTGTTAATACAGAATTTACCGAGGTGTCGATTCCTGCTAATTTAATGGTTGGGACATCAAATGAACTCTTTGACTATATTGCATCAGAACTTGCAAAGtttgttaaggaagaaaatgaagattACAAGGTTCCTCCAGGTAGGAAGAGGGAGCTAGGTTTTACCTTTTCCTTTCCTGTCATGCAAACATCAATTTCTTCTGGGAACCTTATCAGGTGGACAAAAGGCTTCAACATTGATGATGCTGTTGGTCAGGATGTTGTGGCTGAATTGAGAAGTGCCATTGAGAGACAAGGTCTTGATATGCACATAACAGCGTTGGTCAACGATACAGTTGGGACATTAGCCGGAGGGCGACATAAAAACAAGGATGTCGTTGCTGCTGTAATTTTAGGTACCGGAACAAATGCAGCCTATGTGGAGAGTGCTCAAGCAATACCAAAATGGCACGGTGATTTGCCAAAGTCCAGAGAAATGGTTATCAACATGGAGTGGGGAAACTTCCGGTCATCCCACCTTCCATTAACTGAGTATGATTATGCATTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATATCCGGAATGTACTTGGGAGAAATTGTTCGCAGAGTACTATACAAAATGGCTGAAGAAGCTTTGATTTTTGGTGAAACTGTTCCTCCAAAACTGAAAGTTCCATCAATATTAAGGACACCTGACATGTCTGCCATGCATCACGACTCATCTGCTGATCTCAATGTGGTCAAAAGCAAACTGAAGGACATTTTTGAGataTCTGATACCTCCCTGCAAGTGAGAAAGGTGGTTGTTGAGCTGTGCAATATCGTTGCTACCCGTGGTGCTCGTCTTTCTGCTGCTGGCATCTTCGGAATTCTGAAGAAGTTAGGAAGAGACACCACCAGCGGCAGTGAGGGTCAGAAGAGTGTGATAGCCATGGATGGTGGATTATATGAGCATTACACTGAATACAGTAAGTGCTTAGAGAATACCTTAACAGAGTTGGTTGGTGAAGATGTTTCAGGAAGTATTGCGGTTGAACACTCTAATGATGGTTCAGGAATTGGTGCTGCACTTCTTGCTGCTTCTCATTCTCATTACCTTGATGCTTAG 1485 0.4276 MGKVVVCATVIGATAACAVATVLIHRYVKKSKRWGKAKAILKEFEEKCATPTLKLKQVADAMTVEMHAGLASEGGSKLKMLISFVDNLPTGNEEGLYYSLDLGGTNFRVLRVQLGGKDGVVNTEFTEVSIPANLMVGTSNELFDYIASELAKFVKEENEDYKVPPGRKRELGFTFSFPVMQTSISSGNLIRWTKGFNIDDAVGQDVVAELRSAIERQGLDMHITALVNDTVGTLAGGRHKNKDVVAAVILGTGTNAAYVESAQAIPKWHGDLPKSREMVINMEWGNFRSSHLPLTEYDYALDAESLNPGEQIFEKIISGMYLGEIVRRVLYKMAEEALIFGETVPPKLKVPSILRTPDMSAMHHDSSADLNVVKSKLKDIFEISDTSLQVRKVVVELCNIVATRGARLSAAGIFGILKKLGRDTTSGSEGQKSVIAMDGGLYEHYTEYSKCLENTLTELVGEDVSGSIAVEHSNDGSGIGAALLAASHSHYLDA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00388 494 Gene3D - 83 485 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 98 114 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 171 196 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 223 239 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 246 260 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 311 333 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 394 416 - -
Tsu08g00388 494 PRINTS Hexokinase family signature 471 487 - -
Tsu08g00388 494 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Tsu08g00388 494 SUPERFAMILY Actin-like ATPase domain 34 241 IPR043129 -
Tsu08g00388 494 PANTHER HEXOKINASE 1 492 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Tsu08g00388 494 Gene3D - 61 474 - -
Tsu08g00388 494 Pfam Hexokinase 246 486 IPR022673 GO:0005524|GO:0005975|GO:0016773
Tsu08g00388 494 Pfam Hexokinase 41 236 IPR022672 GO:0005524|GO:0005975|GO:0016773
Tsu08g00388 494 ProSitePatterns Hexokinase domain signature. 171 196 IPR019807 GO:0004396|GO:0005524|GO:0006096
Tsu08g00388 494 PANTHER HEXOKINASE-1 1 492 - -
Tsu08g00388 494 CDD NBD_sugar-kinase_HSP70_actin 100 260 - -
Tsu08g00388 494 ProSiteProfiles Hexokinase domain profile. 35 486 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Tsu08g00388 494 SUPERFAMILY Actin-like ATPase domain 243 490 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00388 Tsu-Chr8 3784952 3790195 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00388 K00844 - gmx:100783775 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00388 08 3784952 3790195 Tsu08g00388 08 3784952 3790195 ECH