Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00384 ATGGCCTCTTATAGGCCTTTCCCTCCTCCACCGGCGAGTCAAAACCCTAtcgcaccaccaccacctccgcCGCAACAACGCGGGAATAGTAATTGGGGTGGTTATGgttatggtggtggtggtggtgttggtgGAGATTCTTCTACTTCATTCCCTCAAATACCTCCAAATTCAAAttatcaacaacatcatcagcACCAGCATCAGCATCATCATGCTCCTCCTCCACCACCGCCTTCAAATTACTATCCATATCCACCACCGCCGCCTCCACCACCTGAAAATTCATACCAGCCACCACCTCCGCCACCGCCTGGTCCTATGTATTATCCACCTAATAATCAATATAATCATCAACAACCACCGCCTCCGCCACCTCCTTTATCGCCGGGTTCTTCGATGCCACCTCCACCGCCGCCTCCTCCAGCGTCTCCACCTCCTCCGAACAACAATGAAGTGGAGAGGGGAGTCAATAAAGGATCTTCTGGGAGACGCGATGGAGTTCCGCAGCATaaacagcagcagcagcagcacaAGCCTTCTCATGGGCATCCTCCAAGGAGGGTTGAGACGGAGGAAGAGAAGAGgttgaggaagaagaaggagtATGAGAAGCAAAGGCAAGAAGAAAAGCATAGGCAGCAGCAGAAGAAGCTGAAGGAATCACAGAATAGTGTTTTGCAAAAGACTCAGATGGTGTCATCTGGGGGAACTGGAAAGGTGCATGGTTCTATTGCAGGGTCTCGAATGGGAGAGAGGAGAACTGCACCCTTATTGGGCGGTGAGAGGGTTGAAAATAGGTTGAAAAAGCCCACCACTTTTTTGTGTAAGCTGAGATTTCGAAATGAACTTCCGGATCCAACTGCACAACCTAAGCTAATGGCGTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCACTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCCGACCACCTCTTGCtccagaagatgaagatttaTTGCGAGATGATGAAGCTGTTACTCCTATGAAAAAAGATGGTATTAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTTGCTTGGCTTGTTAAAACACAATATATATCTCCTTTAAGCATGGAATCGGCCAAACAGTCGTTAACTGAAAAGCAAGCTAAGGAGCTGAGAGAGAGGAGGGGAGGCCGCAGTCTTTTGGAAAATCTCAACAATAGGGAAAGACAAATCAGGGAAATAGAAGCATCATTTGAAGCAGCTAAGTCCCAACCTGTTCATGCAACTAAAAAAGATTTGTATCCTATTGAGTTTATGCCGTTGTTGCCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCCCCAACAGTTGATTCAGAAATGTACAGTAAGATGGACAAATCTGTTCGGGATGTCTCTGAATCAAGGGCAGTTATGAAAAGTTATGTTGCAACAAGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCATACATGGTCCCAGCACCAGGAGAGCTGTCAAAGGATAtatatgatgaagatgaagacgtCAATTATTCTTGGGTTCGCGAGTATCATTGGGATGTTCGAGGTGACGATGCACATGATCCCACAACATTCTTAGTTTCATTTGATGAGTCAGAAGCTCGTTATTTGCCTCTTCCAACTAAACTAGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCGGGTGATGAGGTTGAACAATTTCCAGCTCCTGCTAGAGTGACCGTGAGGAGAAGATCAAGCGTTGCTGCAATCGAGCGGAAGGATTCTGAGGTTTATACACGTTTGAAGGGAAATTCGTCAAAGAGGCTAGAAATGGATGACGATCTTGACGACCAACATAGAGTTGCAGAGCACCATGATAATTTCCAATCTAGTGGAGGAGAAGATGAAATGTCCGATTGA 2001 0.4168 MASYRPFPPPPASQNPIAPPPPPPQQRGNSNWGGYGYGGGGGVGGDSSTSFPQIPPNSNYQQHHQHQHQHHHAPPPPPPSNYYPYPPPPPPPPENSYQPPPPPPPGPMYYPPNNQYNHQQPPPPPPPLSPGSSMPPPPPPPPASPPPPNNNEVERGVNKGSSGRRDGVPQHKQQQQQHKPSHGHPPRRVETEEEKRLRKKKEYEKQRQEEKHRQQQKKLKESQNSVLQKTQMVSSGGTGKVHGSIAGSRMGERRTAPLLGGERVENRLKKPTTFLCKLRFRNELPDPTAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEAVTPMKKDGIKRKERPTDKGVAWLVKTQYISPLSMESAKQSLTEKQAKELRERRGGRSLLENLNNRERQIREIEASFEAAKSQPVHATKKDLYPIEFMPLLPDFDRYDDQFVVAAFDNAPTVDSEMYSKMDKSVRDVSESRAVMKSYVATSSDPANPEKFLAYMVPAPGELSKDIYDEDEDVNYSWVREYHWDVRGDDAHDPTTFLVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPAPARVTVRRRSSVAAIERKDSEVYTRLKGNSSKRLEMDDDLDDQHRVAEHHDNFQSSGGEDEMSD 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00384 666 MobiDBLite consensus disorder prediction 1 264 - -
Tsu08g00384 666 MobiDBLite consensus disorder prediction 220 238 - -
Tsu08g00384 666 MobiDBLite consensus disorder prediction 46 63 - -
Tsu08g00384 666 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 250 664 - -
Tsu08g00384 666 Coils Coil 189 225 - -
Tsu08g00384 666 MobiDBLite consensus disorder prediction 628 659 - -
Tsu08g00384 666 SUPERFAMILY Formin homology 2 domain (FH2 domain) 104 284 - -
Tsu08g00384 666 MobiDBLite consensus disorder prediction 628 666 - -
Tsu08g00384 666 MobiDBLite consensus disorder prediction 183 219 - -
Tsu08g00384 666 Coils Coil 421 441 - -
Tsu08g00384 666 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 250 664 IPR007133 GO:0006368|GO:0016570|GO:0016593
Tsu08g00384 666 Pfam Paf1 274 648 IPR007133 GO:0006368|GO:0016570|GO:0016593
Tsu08g00384 666 MobiDBLite consensus disorder prediction 72 149 - -
Tsu08g00384 666 MobiDBLite consensus disorder prediction 1 27 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00384 K15174 - gmx:100800148 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00384 08 3754195 3760791 Tsu08g00384 08 3754195 3760791 ECH