Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00381 ATGCGATCATTAACATTAACGCCGCAAACAATGCCGGAAACCTCCGTCAATTTCCGTGCACCACCTCCATCTCCGGTTGCATCCGGTCGTAGATCAACCGTAACAAACAACGAATTTCTAACAGAGTTTTTAGAAACCTCACTTCGAGTTCCAGATCTAGTTTTACCTGACAAGATTTTTCCGAAACAGATCAATCACGAAACTCCACCGAAAATCGATTTCGTTTCGCTGTGTTTTCACAAAGATGAAGATCTAATCGACGTTGTTTTGGAGTCCATAGCTAGATTCGGATGCTTTCAACTTCTCAACCACGGGATTCCGCAGCAACTAATGGCTTCTGCAGTTGAGGCTGCCGGAGGAATATTTTTGGTGCCGCCGGGAAAGAGAGATGCTGTGACGCGGTCGCCGGAGAAACTTTGGGGTTTTGAAGAGTATCGTGAAGGAGAAGAGGAAGGAAGTGAATTGAATGAAGAATTTATTTGGCGCAAGGATGAAGAGTTGAAGTTGAAAATGGAGGGAATTTGGCCTATTGGATATCCTAATTTTAgCAAGAAGATGGAAACCTTACAATCACGTGTGGAGAAGGTGGCAGACAAAATTTTGCCTATCATATTGAAAAATGTTCCTAAGAAATTAGCAAGTAATGGTGATATAATTAGTCATGGAAATGAAGTTGGGACACTATGTTGCATTTACAAACATCGCCAAGATATTAATAGGAACAATCAATGGGTTGATTCTTTGAAATATGATGTGATTAGAATGCTGATTAGGGGAACAGATTACTCACATTCTTTGTGTTTTCATGTGTGTGATGGCTCTTCAGAGTTTCATGTTTATTCCAAGAAAAGTTGGTTGTCTTTCTGTCCTGAACAAGGTGCCCTTGTAATCACTGCTGGAGATCAAATACAGGTATTGAGTGGTGGGCACTACAAGGATGTGATTGGAAAGGCAATCTTTAAAGGCGAAAGAGAAGACAACATTTCAATGGCGTTTCTCTATTCTCCTCAAAACaccaagaaaaaaattcaaaccaataGGGAAAGACCTATTTCACTTAGCCAACAAGCCATCTTGGCTGTAATTTTGAACCTTGTGTACCATGTCCTAATTTttgtcttgaaataa 1128 0.3945 MRSLTLTPQTMPETSVNFRAPPPSPVASGRRSTVTNNEFLTEFLETSLRVPDLVLPDKIFPKQINHETPPKIDFVSLCFHKDEDLIDVVLESIARFGCFQLLNHGIPQQLMASAVEAAGGIFLVPPGKRDAVTRSPEKLWGFEEYREGEEEGSELNEEFIWRKDEELKLKMEGIWPIGYPNFSKKMETLQSRVEKVADKILPIILKNVPKKLASNGDIISHGNEVGTLCCIYKHRQDINRNNQWVDSLKYDVIRMLIRGTDYSHSLCFHVCDGSSEFHVYSKKSWLSFCPEQGALVITAGDQIQVLSGGHYKDVIGKAIFKGEREDNISMAFLYSPQNTKKKIQTNRERPISLSQQAILAVILNLVYHVLIFVLK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00381 375 PANTHER - 13 375 - -
Tsu08g00381 375 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 375 - -
Tsu08g00381 375 MobiDBLite consensus disorder prediction 1 32 - -
Tsu08g00381 375 Gene3D - 49 356 IPR027443 -
Tsu08g00381 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 70 164 IPR026992 -
Tsu08g00381 375 MobiDBLite consensus disorder prediction 1 17 - -
Tsu08g00381 375 SUPERFAMILY Clavaminate synthase-like 58 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00381 Tsu-Chr8 3710362 3713238 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00381 - - aprc:113851004 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00381 08 3710362 3713238 Tsu08g00381 08 3710362 3713238 ECH