Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00373 ATGAAAGATTTAGCTTCAAACGAATCTCAAACCTCTAAGCTCTCTATGGACGAGATACTTGAATTGGAACGAATATACAATGATGTGGGTGAAAAATCACTTGATCATAATTTCTGCAAGGATATTGCTACAAGTTTTAGCTCTTCATCAAACAGTGTTGGTAAAAATTCTTTATCATGGGAACAGGTGCAGCAGTGGttccaaaataaacataaagaatCAAAGGGTCAGTTTACTTCATCACCTGAGGGGCTGAACCTATTTGTTGATCTTTCGGACAAATCTTCGAAAAAGGGACATAAAAGCTCTCCGAAACCAAAagGTATTCAAGCTGCAGATCTATCAGAAATGGCATTTGAAGCAATATCTATAAAAGACAATGCATGGCATGACGTTGCAATGTTTCTGAACTATAGAGTGCTATGCACAGGCGAACTTGAAGTTCGTGTACGCTATCATGGATTCAGTAAGGATGAAGATGAATGGATTAATGTGAAAGACGGGGTGCGGCAAAGATCCATCCCATTGGAAGCTTCAGAGTGTCACAAGGTGAAGGAAGGACATCTCGTACTATGTTTCCTGGAAAAATCTGATTATGCCCTTTATTGTGATGCTCGTGTTTTGAAAATCGAGAGGAGGGTACATGATAGCAAAGAGTGTAGCTGCATCTTCACCGTCCGGTTTTACCATGACAAGTCTGAGGAAGAAGTTCGTTGGGACGGTATATGCTGTAGGCCAACACAAGAAGAAGCTGAGGCTCCCTTAGAAGCTTTCCTGAACCCCATAGAGACCTTGTGGGGATAG 804 0.4055 MKDLASNESQTSKLSMDEILELERIYNDVGEKSLDHNFCKDIATSFSSSSNSVGKNSLSWEQVQQWFQNKHKESKGQFTSSPEGLNLFVDLSDKSSKKGHKSSPKPKGIQAADLSEMAFEAISIKDNAWHDVAMFLNYRVLCTGELEVRVRYHGFSKDEDEWINVKDGVRQRSIPLEASECHKVKEGHLVLCFLEKSDYALYCDARVLKIERRVHDSKECSCIFTVRFYHDKSEEEVRWDGICCRPTQEEAEAPLEAFLNPIETLWG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00373 267 Gene3D - 114 175 - -
Tsu08g00373 267 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
Tsu08g00373 267 Gene3D - 176 248 - -
Tsu08g00373 267 Pfam SAWADEE domain 116 243 IPR032001 GO:0003682
Tsu08g00373 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 1 249 - -
Tsu08g00373 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 249 IPR039276 -
Tsu08g00373 267 SUPERFAMILY Homeodomain-like 17 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00373 Tsu-Chr8 3646914 3651425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00373 - - gmx:100799110 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00373 08 3646914 3651425 Tsu08g00373 08 3646914 3651425 ECH