Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00370 ATGGCACCTCATGGAGAATCTTTGTTATCAACTTCATTAATCTCAAGGAGcaacaacaaatcaacaaaGCTCTCAAATTCCGACCATCTTCAAAGAACGATATCGGACATTTCATTCGAGTTGACAaaagaaattgataattttaatctACCATCAATATCCGAAGTTGAAGATGCAAAGTGTGAGTGTTGTGGCATGTCCGAGGAATGTACACCCGAGTACATAGACCGAATTCGCAACAAATTCGAAGGGAAATTTGTGTGCGGATTGTGTTCTGAGGCGGTGAAGGAAGAGTTGGTTAAAAATGGAGGCGAAAAATTGGATGAAGCTTTAAGTACACATATGAATGCATGTGCTAAGTTTAACAAATATGGTAGGGCTTTTCCTGTTTTGTTTCAAGCTCAAGCTATGAAAGAGATGCTAAAAAAGAGTAACTTAGATGGAAAAATTAGGGCTAAGTCAATGAGTCCACGGGACAAGAAAGGAGGAGGAGGTCTTGCTCGTAGTTCAAGTTGTATTCCAGCACTTACAAGAGAGATCAACAATATCAAAATAGCAAATTAA 564 0.3688 MAPHGESLLSTSLISRSNNKSTKLSNSDHLQRTISDISFELTKEIDNFNLPSISEVEDAKCECCGMSEECTPEYIDRIRNKFEGKFVCGLCSEAVKEELVKNGGEKLDEALSTHMNACAKFNKYGRAFPVLFQAQAMKEMLKKSNLDGKIRAKSMSPRDKKGGGGLARSSSCIPALTREINNIKIAN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00370 187 PANTHER CASP-LIKE PROTEIN (DUF1677) 9 184 - -
Tsu08g00370 187 MobiDBLite consensus disorder prediction 151 170 - -
Tsu08g00370 187 Pfam Protein of unknown function (DUF1677) 56 143 IPR012876 -
Tsu08g00370 187 PANTHER OS01G0745000 PROTEIN 9 184 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00370 Tsu-Chr8 3606732 3607497 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00370 - - gmx:100816162 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00370 08 3606732 3607497 Tsu08g00370 08 3606732 3607497 ECH
Tsu02g05431 02 62823486 62824664 Tsu08g00370 08 3606732 3607497 PCT