Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00356 ATGGAAACGAGTAGAAGAGCGGTGGAATCGTACTGGAGATCAAGGTTAATCGATTCAGCTACATCAGATGAAGATAAAGTTACACCTGTTTACAAATTGGAAGAAATTTGTGAGCTTTTGCGTTCTTCACATGTTTCTATTGTTAAGGAACTTTCAGATTTTGTTTTGAAACGTTTGGATCATAAAAGTCCCATTGTAAAACAGAAGGCTTTAAGATTGATAAAATATGCTGTTGGTAAGTCTGGTGCCGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCAATTCGTCAATTATTGCACTACAAGGGACAGTTGGATCCTTTGAAAGGCGATGCACTAAATAAGGCTGTACGGGACACTGCTCAGGAGGCCGTCTCTGCCATCTTCTCAGAagataatagtaataataataatattaaggTCGCCGCACCTTCTCAAGATCTTAACAGGCGGATACAAGGGTTTGGGAATACAAACTATGAGCCGCCATCTGAAGATAAGAAGTCTTTTATTAGTGAGGTAGTTGGTATTGGAAGTGCATCGATTAAGCAAGGAATTCACAGCTTAACACAAGGACATTCACTAATGAAGAATGAAACTGGAAGTGGAAGCTACAAGAGTCCAAATCTTCAAAGGTCGCTGACCAACGAATCAGAACATGGTGATAGATATGTACCAGTTGCGTATCGTAGTGAAACTCAGAGTAGTTTTGGACTTCCAAAGAATCAATCTAGTGGTTCTTGGAATCAGGATTCTAGAGTAACTAAGATGGATATTTCAAATGGTGAATCCAGTGGAAATTCTTCAGAGACTAAGACTAGAGAAGATAGGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGTCTACAGCCCTCTCGAGATGCCATTCAAGCTTTTCTAACAGAGGCTGCAAAGTTGGATGCCCTAGCTTTAAGTCATGCCCTTGAACTAAAGCTACAATCTCCTATTTGGCAGGTGCGCATGAAAGCTGTCTGTGTTCTTGAGTCCGTCCTCAGAAAGAAGGATGATGAACATTTTTCATATGTGGCATCTTACTTCACTGAAAATAATGACGTCGTGCAGAAATGTTCCGAATCTCCCCAAGCCTCTTTGAGGGAAAAGGCTATAAAGGTTCTTGGTCTTCTAGGTGGAGGCCAGCCAAATAGTTCTGCTATTAGTTCAGAGAAAGCTGTAAAGACAGAGCGTCCTGTTGTTGCTGAATTGCCTGACTTGATAGACACTGGCGATTCAAATGATAACACAACCAATACGGCAAATGAACAAAGTATAGGGAATTTGACATCATCCGCACCTCTGGTTGATGATTTATTTGGCGATATAAGTAGCTCTATTGGAGCTACTCATGAACTGAAAAATGACGACGACCCATTTGCAGATGTATCATTTCATTCAGGCGAGAGCAAAGAACAAGCGGATGATCTGTTTTCAGGGATGACAGTTGGCAGTGATAAACCGGTCGACCATGTGAGTCTCAAGCAGGGGATTCAAAGTGATCCTCAACTTTTTGACATTTTTGCTTCTAGTTCCAAGCAAGGAAATCATAACGAGTCTGTTGGTGATTTAATGGGTGGTTTGTCAATAAATGAAAATACCTCATGTACGACGAAGCAGAAGGGAACCTATTCTGCGGTGCAATCTGAATCTTTATTTTCAGGTTTAAACAACCACACCCCTGAGAATAATACTCTAGGTGGCATGTTGGGCTCTCAGGCTCAGCCAGTTGGGTTCAATGGAAACCCGATGTTTCCCACCGGTCATCTGCCTTATAACATGCAACCTGGTATTATGTTGAACCAGCCATACCCTTCTCAGCCTCTTAATTATGGTGCCATGGGAACTCTCTTAGCTCAGCAACAACTACTTGCTACAATGGCTAATTTCCAACACCTTAGTAATGTCAACATGAGAGATGATGGCGTTGCTCAAATGGTTGGACCTAATGGAAATTCACCTTTGCCGGACATATTTCAACCAAATTTTGCATCTCAAACTCCCAGCTCAATGATCAATAattcaaagaaagaagataatactaAAGCATTTGATTTTATCTCGGACCATCTTAACTCTGCTCGTGATTCAAGGAGAGTGATTTGA 2124 0.4082 METSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEICELLRSSHVSIVKELSDFVLKRLDHKSPIVKQKALRLIKYAVGKSGAEFRREMQRHSVAIRQLLHYKGQLDPLKGDALNKAVRDTAQEAVSAIFSEDNSNNNNIKVAAPSQDLNRRIQGFGNTNYEPPSEDKKSFISEVVGIGSASIKQGIHSLTQGHSLMKNETGSGSYKSPNLQRSLTNESEHGDRYVPVAYRSETQSSFGLPKNQSSGSWNQDSRVTKMDISNGESSGNSSETKTREDRLLETIVTSGGVRLQPSRDAIQAFLTEAAKLDALALSHALELKLQSPIWQVRMKAVCVLESVLRKKDDEHFSYVASYFTENNDVVQKCSESPQASLREKAIKVLGLLGGGQPNSSAISSEKAVKTERPVVAELPDLIDTGDSNDNTTNTANEQSIGNLTSSAPLVDDLFGDISSSIGATHELKNDDDPFADVSFHSGESKEQADDLFSGMTVGSDKPVDHVSLKQGIQSDPQLFDIFASSSKQGNHNESVGDLMGGLSINENTSCTTKQKGTYSAVQSESLFSGLNNHTPENNTLGGMLGSQAQPVGFNGNPMFPTGHLPYNMQPGIMLNQPYPSQPLNYGAMGTLLAQQQLLATMANFQHLSNVNMRDDGVAQMVGPNGNSPLPDIFQPNFASQTPSSMINNSKKEDNTKAFDFISDHLNSARDSRRVI 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00356 707 Pfam ENTH domain 16 128 IPR013809 -
Tsu08g00356 707 SMART VHS_2 13 153 IPR002014 GO:0035091|GO:0043130
Tsu08g00356 707 MobiDBLite consensus disorder prediction 195 222 - -
Tsu08g00356 707 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Tsu08g00356 707 MobiDBLite consensus disorder prediction 235 269 - -
Tsu08g00356 707 MobiDBLite consensus disorder prediction 416 434 - -
Tsu08g00356 707 MobiDBLite consensus disorder prediction 235 276 - -
Tsu08g00356 707 SUPERFAMILY ARM repeat 33 419 IPR016024 -
Tsu08g00356 707 Gene3D - 2 140 IPR008942 -
Tsu08g00356 707 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Tsu08g00356 707 MobiDBLite consensus disorder prediction 411 434 - -
Tsu08g00356 707 MobiDBLite consensus disorder prediction 195 216 - -
Tsu08g00356 707 PANTHER UNCHARACTERIZED 1 700 IPR039273 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00356 - - gmx:100790466 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00356 08 3438887 3445753 Tsu08g00356 08 3438887 3445753 ECH