Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00333 ATGTATGCTGATCGGGTTGAAAGTGGAGCGAGAAGGTCTGTTAAGGAACGTCTTGATGGAAGCATCAGTGTTTCTACTCGGCAGCAACGCCAAGTTACTGGCAAAAGGTCGAGGCAAGATGACAAGTGGGAACATGATCtatatgatgatgaagaaaaaccCCAGATCACTAATCGCAAAGTTGCTGGTCAAGATCTTCGTCATAAGCTTCAAAAGAAAGGTCTTCAACCTGCAACTCGGAGTGGAAAGAGTTCTGCTCCAAACATCCGGGATCTTCGCGAAAGACTATCAGGGACAATGAATCAACAACCTAAAAACTCTGATCCACCAAAGTCGAAAGTGATTGCTAAACCGAGCAGTAAAAGCGTTGGTGTTGAGGCTCCTGCAGTAAAAAAACCAGCTAAACCAGCTCCTAAAAAGGCACGGAAGGCTGATAATACTACAGTGGATGATTTTTTGCTGTCCTTGGGTCTCGAGAAGTATCTCATAACTTTTCAAGCTGAAGAAgtTGATATGGCAGCTCTCAAACATATGACTGATGAGGACCTCAAGGTTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCCTTGGAGTCAAAAGTCTGA 615 0.426 MYADRVESGARRSVKERLDGSISVSTRQQRQVTGKRSRQDDKWEHDLYDDEEKPQITNRKVAGQDLRHKLQKKGLQPATRSGKSSAPNIRDLRERLSGTMNQQPKNSDPPKSKVIAKPSSKSVGVEAPAVKKPAKPAPKKARKADNTTVDDFLLSLGLEKYLITFQAEEVDMAALKHMTDEDLKVMGIPMGPRKKILLALESKV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00333 204 MobiDBLite consensus disorder prediction 33 72 - -
Tsu08g00333 204 SUPERFAMILY SAM/Pointed domain 146 201 IPR013761 -
Tsu08g00333 204 MobiDBLite consensus disorder prediction 1 144 - -
Tsu08g00333 204 MobiDBLite consensus disorder prediction 1 18 - -
Tsu08g00333 204 CDD SAM_superfamily 149 201 - -
Tsu08g00333 204 MobiDBLite consensus disorder prediction 95 109 - -
Tsu08g00333 204 SMART SAM_4 141 204 IPR001660 GO:0005515
Tsu08g00333 204 Gene3D - 145 204 IPR013761 -
Tsu08g00333 204 PANTHER OSJNBA0060P14.15 PROTEIN 127 190 - -
Tsu08g00333 204 PANTHER OSJNBA0060P14.15 PROTEIN 1 113 - -
Tsu08g00333 204 Pfam SAM domain (Sterile alpha motif) 146 201 IPR001660 GO:0005515
Tsu08g00333 204 ProSiteProfiles SAM domain profile. 144 204 IPR001660 GO:0005515
Tsu08g00333 204 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 127 190 - -
Tsu08g00333 204 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00333 Tsu-Chr8 3234548 3240479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00333 38 203 Glycosyltransferase AT3G07170 61.078 5.30e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00333 - - gmx:100784706 270.011